RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1022139", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1022139 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8656766 8656766 PRJNA1022139_P_NODE_38827_length_246_cov_0.890173_g38722_i0 PRJNA1022139 38827 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 140 6.2e-37   NR MDD3095752.1 2026760 g38722 i0 79 31.7682926829268 81 17 98.8 0 4 246 260 340 MDD3095752.1 L-glutamate gamma-semialdehyde dehydrogenase [Fidelibacterota bacterium] diamond 7815 140 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27698704 27698704 PRJNA1022139_P_NODE_17464_length_331_cov_1.790698_g17359_i0 PRJNA1022139 17464 331 1.790698 5.92721038 Fidelibacterota bacterium 2026760 Bacteria Bacteria 104 9.37e-25   NR MCJ7802071.1 2026760 g17359 i0 50.5 0.879154078549849 97 46 86.1 2 315 31 173 269 MCJ7802071.1 lipase family protein [Fidelibacterota bacterium] diamond 291 104 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29940376 29940376 PRJNA1022139_P_NODE_8711_length_448_cov_1.224000_g8606_i0 PRJNA1022139 8711 448 1.224 5.48352 Fidelibacterota bacterium 2026760 Bacteria Bacteria 50.4 2.68e-4   NR PCJ12276.1 2026760 g8606 i0 29.2 0.482142857142857 72 50 47.5 1 335 123 118 189 PCJ12276.1 MAG: hypothetical protein COA98_05575, partial [Fidelibacterota bacterium] diamond 216 50.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31298830 31298830 PRJNA1022139_P_NODE_30915_length_263_cov_1.800000_g30810_i0 PRJNA1022139 30915 263 1.8 4.734 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.5 0.0115   NR HIN01816.1 2026760 g30810 i0 38.8 1.11787072243346 49 26 55.9 1 114 260 14 58 HIN01816.1 Hsp20/alpha crystallin family protein [Fidelibacterota bacterium] diamond 294 43.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;