RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1022139", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1022139 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27761786 27761786 PRJNA1022139_P_NODE_26484_length_279_cov_2.441748_g26379_i0 PRJNA1022139 26484 279 2.441748 6.81247692 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 44.3 0.0152   NR HXF75777.1 2072417 g26379 i0 31.9 0.774193548387097 72 40 77.4 1 232 17 186 248 HXF75777.1 class I SAM-dependent methyltransferase [Candidatus Methylomirabilota bacterium] diamond 216 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30911943 30911943 PRJNA1022139_P_NODE_27514_length_276_cov_1.182266_g27409_i0 PRJNA1022139 27514 276 1.182266 3.26305416 Pseudomonadati 3379134 Bacteria Bacteria 99.8 5.37e-22   NR HSL18444.1 2072417 g27409 i0 58.9 1.97826086956522 90 37 97.8 0 1 270 832 921 HSL18444.1 phosphoribosylformylglycinamidine synthase [Candidatus Methylomirabilota bacterium] diamond 546 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31678319 31678319 PRJNA1022139_P_NODE_7017_length_495_cov_2.189573_g6912_i0 PRJNA1022139 7017 495 2.189573 10.83838635 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 183 1.7199999999999997e-55   NR HXJ83355.1 2032687 g6912 i0 55 1.80606060606061 149 64 89.7 2 50 493 46 192 HXJ83355.1 hypothetical protein [Candidatus Methylomirabilis sp.] diamond 894 183 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;