RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1022139", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31267260 31267260 PRJNA1022139_P_NODE_14855_length_355_cov_1.173759_g14750_i0 PRJNA1022139 14855 355 1.173759 4.16684445 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 51.6 4.45e-5   NR MBN2199813.1 2052149 g14750 i0 33.3 0.659154929577465 78 52 65.9 0 272 39 74 151 MBN2199813.1 PH domain-containing protein [Candidatus Aminicenantes bacterium] diamond 234 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
32089679 32089679 PRJNA1022139_P_NODE_18598_length_323_cov_0.884000_g18493_i0 PRJNA1022139 18598 323 0.884 2.85532 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 130 6.480000000000001e-36   NR MDH4272085.1 2052149 g18493 i0 54.3 3.87306501547988 105 47 96.6 1 3 314 30 134 MDH4272085.1 lipocalin family protein [Candidatus Aminicenantes bacterium] diamond 1251 130 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;