RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where bioproject = "PRJNA1022139" and tax_clade = "Apusozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 32 ✖

bioproject 1

  • PRJNA1022139 · 32 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1436441 1436441 PRJNA1022139_P_NODE_28682_length_271_cov_2.878788_g28577_i0 PRJNA1022139 28682 271 2.878788 7.80151548 Thecamonas trahens 529818 Root_unresolved Root_unresolved 134 8.630000000000001e-27   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g28577 i0 83.688 0.774907749077491 141 23 52 0 58 198 290 150 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 210 134 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1436585 1436585 PRJNA1022139_P_NODE_742_length_1305_cov_6.233766_g702_i0 PRJNA1022139 742 1305 6.233766 81.3506463 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 401 6.4e-135   NR XP_013760592.1 461836 g702 i0 66.7 0.703448275862069 306 98 69.9 2 1303 392 37 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 918 401 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
2711928 2711928 PRJNA1022139_P_NODE_15843_length_346_cov_0.978022_g15738_i0 PRJNA1022139 15843 346 0.978022 3.38395612 Thecamonas trahens 529818 Root_unresolved Root_unresolved 106 2.48e-18   NTclustered gi|923122075|ref|XM_013899054.1| 461836 g15738 i0 85.294 16.121387283237 102 15 29 0 3 104 1543 1644 Thecamonas trahens ATCC 50062 PL10b protein (AMSG_08727), partial mRNA blastn 5578 106 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
7814252 7814252 PRJNA1022139_P_NODE_29207_length_270_cov_1.172589_g29102_i0 PRJNA1022139 29207 270 1.172589 3.1659903 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 107 1.32e-24   NR XP_013756129.1 461836 g29102 i0 57.8 1 90 38 100 0 270 1 27 116 XP_013756129.1 RNA helicase in the DEAH-box family protein [Thecamonas trahens ATCC 50062] diamond 270 107 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16738665 16738665 PRJNA1022139_P_NODE_3274_length_693_cov_1.700000_g3174_i0 PRJNA1022139 3274 693 1.7 11.781 Thecamonas trahens 529818 Root_unresolved Root_unresolved 324 1.33e-83   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g3174 i0 78.464 19.3376623376623 534 87 75 21 108 624 720 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 13401 324 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18013381 18013381 PRJNA1022139_P_NODE_15015_length_353_cov_2.017857_g14910_i0 PRJNA1022139 15015 353 2.017857 7.12303521 Thecamonas trahens 529818 Root_unresolved Root_unresolved 320 8.29e-83   NTclustered gi|923137248|ref|XM_013906635.1| 461836 g14910 i0 83.728 92.9348441926346 338 55 96 0 1 338 1215 1552 Thecamonas trahens ATCC 50062 inositol-3-phosphate synthase (AMSG_00912), mRNA blastn 32806 320 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18013651 18013651 PRJNA1022139_P_NODE_815_length_1262_cov_2.507990_g767_i0 PRJNA1022139 815 1262 2.50799 31.6508338 Amastigomonas marina 234594 Root_unresolved Root_unresolved 959 0   NTclustered gi|31982973|gb|AY236711.1| 234594 g767 i0 80.577 95.3058637083994 1282 217 99 22 1 1257 353 1627 Amastigomonas marina heat shock protein 90 (Hsp90) gene, partial cds blastn 120276 959 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Amastigomonas Amastigomonas marina
20562758 20562758 PRJNA1022139_P_NODE_19697_length_315_cov_1.181818_g19592_i0 PRJNA1022139 19697 315 1.181818 3.7227267 Thecamonas trahens 529818 Root_unresolved Root_unresolved 285 2.67e-72   NTclustered gi|923123076|ref|XM_013899554.1| 461836 g19592 i0 83.121 109.552380952381 314 51 99 2 1 313 4278 3966 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_12222), partial mRNA blastn 34509 285 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26813484 26813484 PRJNA1022139_P_NODE_5581_length_549_cov_1.735294_g5477_i0 PRJNA1022139 5581 549 1.735294 9.52676406 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 80.5 5.23e-14   NR XP_013755586.1 461836 g5477 i0 34 0.868852459016393 159 89 81.4 6 515 69 296 448 XP_013755586.1 pregnancy-associated glycoprotein 6 [Thecamonas trahens ATCC 50062] diamond 477 80.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26877010 26877010 PRJNA1022139_P_NODE_22841_length_294_cov_0.986425_g22736_i0 PRJNA1022139 22841 294 0.986425 2.9000895 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 69.7 2.07e-11   NR XP_013761298.1 461836 g22736 i0 42.5 0.816326530612245 80 41 76.5 1 47 271 299 378 XP_013761298.1 uncharacterized protein AMSG_01785 [Thecamonas trahens ATCC 50062] diamond 240 69.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27098096 27098096 PRJNA1022139_P_NODE_22502_length_296_cov_1.053812_g22397_i0 PRJNA1022139 22502 296 1.053812 3.11928352 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 90.5 9.15e-19   NR XP_013757797.1 461836 g22397 i0 49 1.01351351351351 100 48 99.3 2 294 1 175 273 XP_013757797.1 beta-lactamase [Thecamonas trahens ATCC 50062] diamond 300 90.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27192878 27192878 PRJNA1022139_P_NODE_40982_length_243_cov_0.905882_g40877_i0 PRJNA1022139 40982 243 0.905882 2.20129326 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.3 3.47e-8   NR XP_013755470.1 461836 g40877 i0 50.8 2.64197530864198 65 32 80.2 0 242 48 60 124 XP_013755470.1 phosphoglycolate phosphatase [Thecamonas trahens ATCC 50062] diamond 642 59.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27256124 27256124 PRJNA1022139_P_NODE_10483_length_412_cov_1.356932_g10378_i0 PRJNA1022139 10483 412 1.356932 5.59055984 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.6 4.24e-8   NR XP_013758618.1 461836 g10378 i0 37.8 0.713592233009709 98 58 69.9 2 113 400 56 152 XP_013758618.1 PKHD domain-containing transmembrane protein [Thecamonas trahens ATCC 50062] diamond 294 61.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28393016 28393016 PRJNA1022139_P_NODE_626_length_1380_cov_3.136190_g592_i0 PRJNA1022139 626 1380 3.13619 43.279422 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 58.9 2.96e-5   NR XP_013762195.1 461836 g592 i0 28.2 1.5195652173913 156 104 32.4 2 1088 642 86 240 XP_013762195.1 uncharacterized protein AMSG_01018 [Thecamonas trahens ATCC 50062] diamond 2097 58.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28456305 28456305 PRJNA1022139_P_NODE_36066_length_249_cov_0.875000_g35961_i0 PRJNA1022139 36066 249 0.875 2.17875 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 42.7 0.0394   NR XP_013762208.1 461836 g35961 i0 37.2 2.01204819277108 78 43 94 2 15 248 485 556 XP_013762208.1 CAMK protein kinase [Thecamonas trahens ATCC 50062] diamond 501 42.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28701061 28701061 PRJNA1022139_P_NODE_17167_length_334_cov_0.885057_g17062_i0 PRJNA1022139 17167 334 0.885057 2.95609038 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.8 1.72e-10   NR XP_013758281.1 461836 g17062 i0 39.4 1.94910179640719 104 58 93.4 1 22 333 51 149 XP_013758281.1 uncharacterized protein AMSG_04606 [Thecamonas trahens ATCC 50062] diamond 651 67.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28993218 28993218 PRJNA1022139_P_NODE_17608_length_330_cov_1.498054_g17503_i0 PRJNA1022139 17608 330 1.498054 4.9435782 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 5.44e-9   NR XP_013762337.1 461836 g17503 i0 43.8 0.954545454545455 105 47 92.7 3 328 23 9645 9740 XP_013762337.1 uncharacterized protein AMSG_00600 [Thecamonas trahens ATCC 50062] diamond 315 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29308572 29308572 PRJNA1022139_P_NODE_37869_length_247_cov_0.885057_g37764_i0 PRJNA1022139 37869 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.7 7.23e-10   NR XP_013756399.1 461836 g37764 i0 41.9 1.12955465587045 93 36 91.1 2 226 2 200 292 XP_013756399.1 uncharacterized protein AMSG_06553 [Thecamonas trahens ATCC 50062] diamond 279 64.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29529720 29529720 PRJNA1022139_P_NODE_14490_length_359_cov_1.076923_g14385_i0 PRJNA1022139 14490 359 1.076923 3.86615357 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 68.9 9.46e-11   NR XP_013762411.1 461836 g14385 i0 37.5 0.935933147632312 112 66 90.3 3 17 340 756 867 XP_013762411.1 uncharacterized protein AMSG_00680 [Thecamonas trahens ATCC 50062] diamond 336 68.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29687232 29687232 PRJNA1022139_P_NODE_43010_length_241_cov_0.916667_g42905_i0 PRJNA1022139 43010 241 0.916667 2.20916747 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.4 1.51e-5   NR XP_013757622.1 461836 g42905 i0 35.3 0.846473029045643 68 44 84.6 0 210 7 424 491 XP_013757622.1 voltage-gated Ion Channel superfamily [Thecamonas trahens ATCC 50062] diamond 204 52.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29718873 29718873 PRJNA1022139_P_NODE_4670_length_595_cov_1.549808_g4566_i0 PRJNA1022139 4670 595 1.549808 9.2213576 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 228 6.180000000000001e-70   NR XP_013753190.1 461836 g4566 i0 63.4 1.83529411764706 175 49 80.7 2 588 109 224 398 XP_013753190.1 uncharacterized protein AMSG_12392 [Thecamonas trahens ATCC 50062] diamond 1092 228 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30035059 30035059 PRJNA1022139_P_NODE_37891_length_247_cov_0.885057_g37786_i0 PRJNA1022139 37891 247 0.885057 2.18609079 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 44.3 0.011   NR XP_013753440.1 461836 g37786 i0 43.8 0.582995951417004 48 27 58.3 0 247 104 210 257 XP_013753440.1 uncharacterized protein AMSG_10244 [Thecamonas trahens ATCC 50062] diamond 144 44.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30382896 30382896 PRJNA1022139_P_NODE_21333_length_303_cov_1.926087_g21228_i0 PRJNA1022139 21333 303 1.926087 5.83604361 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.8 1.87e-6   NR XP_013757606.1 461836 g21228 i0 50.9 0.524752475247525 53 25 52.5 1 129 287 181 232 XP_013757606.1 uncharacterized protein AMSG_11926 [Thecamonas trahens ATCC 50062] diamond 159 55.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30603597 30603597 PRJNA1022139_P_NODE_8933_length_443_cov_1.524324_g8828_i0 PRJNA1022139 8933 443 1.524324 6.75275532 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 111 3.49e-26   NR XP_013758081.1 461836 g8828 i0 39.9 3.08803611738149 148 82 96.8 5 438 10 66 211 XP_013758081.1 uncharacterized protein AMSG_05006 [Thecamonas trahens ATCC 50062] diamond 1368 111 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30730058 30730058 PRJNA1022139_P_NODE_754_length_1295_cov_1.846154_g714_i0 PRJNA1022139 754 1295 1.846154 23.9076943 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62.8 2.81e-6   NR XP_013757898.1 461836 g714 i0 31.4 0.324324324324324 140 80 32 5 424 11 3046 3171 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 420 62.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31172141 31172141 PRJNA1022139_P_NODE_38595_length_246_cov_0.890173_g38490_i0 PRJNA1022139 38595 246 0.890173 2.18982558 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.4 4.63e-5   NR XP_013760521.1 461836 g38490 i0 46.3 0.658536585365854 54 22 57.3 3 142 2 11 64 XP_013760521.1 uncharacterized protein AMSG_02675 [Thecamonas trahens ATCC 50062] diamond 162 50.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31203531 31203531 PRJNA1022139_P_NODE_35315_length_250_cov_0.870056_g35210_i0 PRJNA1022139 35315 250 0.870056 2.17514 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.1 4.84e-17   NR XP_013761457.1 461836 g35210 i0 45.8 1.86 83 41 98.4 3 248 3 583 662 XP_013761457.1 uncharacterized protein AMSG_01959 [Thecamonas trahens ATCC 50062] diamond 465 85.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31615139 31615139 PRJNA1022139_P_NODE_21536_length_302_cov_1.344978_g21431_i0 PRJNA1022139 21536 302 1.344978 4.06183356 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 64.3 1.63e-10   NR XP_013760524.1 461836 g21431 i0 32.7 1.06291390728477 107 48 98.3 3 298 2 23 113 XP_013760524.1 iodothyronine deiodinase [Thecamonas trahens ATCC 50062] diamond 321 64.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32184773 32184773 PRJNA1022139_P_NODE_498_length_1487_cov_2.977369_g472_i0 PRJNA1022139 498 1487 2.977369 44.27347703 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 84.7 5.1e-13   NR XP_013757898.1 461836 g472 i0 32.9 0.349024882313383 173 98 34.5 7 770 1282 3046 3202 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 519 84.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32335255 32335255 PRJNA1022139_P_NODE_34159_length_251_cov_1.674157_g34054_i0 PRJNA1022139 34159 251 1.674157 4.20213407 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.7 6.87e-18   NR XP_013754079.1 461836 g34054 i0 53.8 3.62151394422311 80 32 89.6 1 6 230 274 353 XP_013754079.1 uncharacterized protein AMSG_09735 [Thecamonas trahens ATCC 50062] diamond 909 86.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32816158 32816158 PRJNA1022139_P_NODE_24040_length_288_cov_1.432558_g23935_i0 PRJNA1022139 24040 288 1.432558 4.12576704 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 121 1.7e-29   NR XP_013753333.1 461836 g23935 i0 62.4 3.94791666666667 93 35 96.9 0 283 5 4983 5075 XP_013753333.1 auxin transporter [Thecamonas trahens ATCC 50062] diamond 1137 121 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32879123 32879123 PRJNA1022139_P_NODE_28860_length_271_cov_1.404040_g28755_i0 PRJNA1022139 28860 271 1.40404 3.8049484 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 54.3 4.21e-6   NR XP_013758081.1 461836 g28755 i0 47.5 1.80442804428044 59 30 65.3 1 4 180 185 242 XP_013758081.1 uncharacterized protein AMSG_05006 [Thecamonas trahens ATCC 50062] diamond 489 54.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;