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contig_metadata

29 rows where bioproject = "PRJNA1020854" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 29 ✖

bioproject 1

  • PRJNA1020854 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1003526 1003526 PRJNA1020854_S_NODE_7741_length_532_cov_393.558648_g5102_i0 PRJNA1020854 7741 532 393.558648 2093.73200736 Methanobrevibacter 2172 Archaea Archaea 776 0   NTclustered gi|470484903|ref|NR_076674.1| 83816 g5102 i0 95.842 152.934210526316 481 19 90 1 48 527 1045 1525 Methanobrevibacter ruminantium strain M1 23S ribosomal RNA gene, complete sequence blastn 81361 780 0.994871794871795 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
2711735 2711735 PRJNA1020854_S_NODE_8763_length_466_cov_4.224256_g6077_i0 PRJNA1020854 8763 466 4.224256 19.68503296 archaeon 1906665 Archaea Archaea 184 3.31e-56   NR MDP2437002.1 1906665 g6077 i0 68 4.80901287553648 153 40 95.9 2 3 449 52 199 MDP2437002.1 Rab family GTPase [archaeon] diamond 2241 184 1 Archaea               archaeon
3987451 3987451 PRJNA1020854_S_NODE_23464_length_221_cov_3029.932292_g20700_i0 PRJNA1020854 23464 221 3029.932292 6696.15036532 Nanobdellota archaeon 2026764 Archaea Archaea 84.7 9.87e-18   NR MDO8509183.1 2026764 g20700 i0 80 0.746606334841629 55 11 74.7 0 57 221 88 142 MDO8509183.1 tyrosine-type recombinase/integrase [Nanoarchaeota archaeon] diamond 165 84.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
12482036 12482036 PRJNA1020854_S_NODE_21390_length_235_cov_1496.165049_g18626_i0 PRJNA1020854 21390 235 1496.165049 3515.98786515 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 71.6 5.62e-13   NR MEM0332964.1 3121606 g18626 i0 97.1 0.446808510638298 35 1 44.7 0 129 233 1 35 MEM0332964.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 105 71.6 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
15464022 15464022 PRJNA1020854_S_NODE_5613_length_804_cov_402.772903_g3255_i0 PRJNA1020854 5613 804 402.772903 3238.29414012 Methanobrevibacter sp. 66852 Archaea Archaea 463 1.0599999999999998e-162   NR MEE3444449.1 66852 g3255 i0 97.2 1.88059701492537 252 7 94 0 3 758 46 297 MEE3444449.1 HAD-IC family P-type ATPase [Methanobrevibacter sp.] diamond 1512 463 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
18013162 18013162 PRJNA1020854_S_NODE_7735_length_532_cov_1177.351889_g5096_i0 PRJNA1020854 7735 532 1177.351889 6263.51204948 Archaea 2157 Archaea Archaea 125 2.28e-30   NR MEM0326648.1 2184738 g5096 i0 62.2 1.1109022556391 98 36 54.7 1 106 396 331 428 MEM0326648.1 hypothetical protein [Desulfurococcaceae archaeon] diamond 591 125 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
19286714 19286714 PRJNA1020854_S_NODE_30996_length_184_cov_3751.845161_g28232_i0 PRJNA1020854 30996 184 3751.845161 6903.39509624 Nanobdellota archaeon 2026764 Archaea Archaea 87.8 4.95e-20   NR MEK6894099.1 2026764 g28232 i0 89.4 0.766304347826087 47 5 76.6 0 142 2 122 168 MEK6894099.1 hypothetical protein [Nanoarchaeota archaeon] diamond 141 87.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
21838039 21838039 PRJNA1020854_S_NODE_42998_length_151_cov_2.500000_g40234_i0 PRJNA1020854 42998 151 2.5 3.775 Methanothrix soehngenii 2223 Archaea Archaea 279 5.19e-71   NTclustered gi|328927127|gb|CP002565.1| 990316 g40234 i0 100 1.47019867549669 151 0 100 0 1 151 553240 553390 Methanosaeta concilii GP-6, complete genome blastn 222 279 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
23113319 23113319 PRJNA1020854_S_NODE_30759_length_185_cov_3309.711538_g27995_i0 PRJNA1020854 30759 185 3309.711538 6122.9663453 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 91.3 1.33e-19   NR MCC5994579.1 3121606 g27995 i0 86 0.810810810810811 50 7 81.1 0 150 1 177 226 MCC5994579.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 150 91.3 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
26876964 26876964 PRJNA1020854_S_NODE_26661_length_203_cov_12.051724_g23897_i0 PRJNA1020854 26661 203 12.051724 24.46499972 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 124 1.8e-32   NR MCC5994635.1 3121606 g23897 i0 93.4 0.901477832512315 61 4 90.1 0 21 203 175 235 MCC5994635.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 183 124 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
27351242 27351242 PRJNA1020854_S_NODE_26483_length_204_cov_5.365714_g23719_i0 PRJNA1020854 26483 204 5.365714 10.94605656 Caldisphaera sp. 2060322 Archaea Archaea 100 4.34e-25   NR PMP88171.1 2060322 g23719 i0 76.7 0.882352941176471 60 14 88.2 0 200 21 11 70 PMP88171.1 MAG: hypothetical protein C0172_03270 [Caldisphaera sp.] diamond 180 100 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Caldisphaeraceae Caldisphaera Caldisphaera sp.
27666920 27666920 PRJNA1020854_S_NODE_22824_length_225_cov_33.209184_g20060_i0 PRJNA1020854 22824 225 33.209184 74.720664 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 121 5.839999999999999e-31   NR MCC5994730.1 3121606 g20060 i0 81.6 1.01333333333333 76 13 100 1 1 225 278 353 MCC5994730.1 AAA family ATPase [Candidatus Aenigmatarchaeota archaeon] diamond 228 121 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
27824773 27824773 PRJNA1020854_S_NODE_13124_length_334_cov_6.406557_g10360_i0 PRJNA1020854 13124 334 6.406557 21.39790038 archaeon 1906665 Archaea Archaea 141 4.66e-41   NR RYG61134.1 1906665 g10360 i0 73.3 0.808383233532934 90 24 80.8 0 334 65 25 114 RYG61134.1 MAG: hypothetical protein EON64_18795 [archaeon] diamond 270 141 1 Archaea               archaeon
28045591 28045591 PRJNA1020854_S_NODE_41505_length_154_cov_2.912000_g38741_i0 PRJNA1020854 41505 154 2.912 4.48448 Thermoproteota archaeon 2056631 Archaea Archaea 76.6 1.24e-14   NR MDT7864924.1 2056631 g38741 i0 76.5 0.993506493506494 51 12 99.4 0 2 154 459 509 MDT7864924.1 hypothetical protein [Thermoproteota archaeon] diamond 153 76.6 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28171889 28171889 PRJNA1020854_S_NODE_33186_length_177_cov_2.554054_g30422_i0 PRJNA1020854 33186 177 2.554054 4.52067558 Thermoplasmata archaeon 1906666 Archaea Archaea 42.4 0.0148   NR HEY4704964.1 1906666 g30422 i0 55.2 0.491525423728814 29 13 49.2 0 50 136 128 156 HEY4704964.1 DUF3795 domain-containing protein [Thermoplasmata archaeon] diamond 87 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28519368 28519368 PRJNA1020854_S_NODE_34047_length_174_cov_2.627586_g31283_i0 PRJNA1020854 34047 174 2.627586 4.57199964 Nanobdellota archaeon 2026764 Archaea Archaea 77 2.5e-15   NR MFC1685439.1 2026764 g31283 i0 61.4 0.982758620689655 57 22 98.3 0 172 2 74 130 MFC1685439.1 (Fe-S)-binding protein [Nanoarchaeota archaeon] diamond 171 77 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28582533 28582533 PRJNA1020854_S_NODE_39387_length_159_cov_2.692308_g36623_i0 PRJNA1020854 39387 159 2.692308 4.28076972 Thermoproteota archaeon 2056631 Archaea Archaea 89 4.58e-19   NR MDT7864683.1 2056631 g36623 i0 93.3 0.849056603773585 45 3 84.9 0 25 159 1 45 MDT7864683.1 hypothetical protein [Thermoproteota archaeon] diamond 135 89 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28866527 28866527 PRJNA1020854_S_NODE_28948_length_193_cov_3.158537_g26184_i0 PRJNA1020854 28948 193 3.158537 6.09597641 Candidatus Brockarchaeota archaeon 2815303 Archaea Archaea 77.8 9.3e-16   NR MBO3757533.1 2815303 g26184 i0 96.9 0.994818652849741 64 2 99.5 0 2 193 109 172 MBO3757533.1 hypothetical protein [Candidatus Brockarchaeota archaeon] diamond 192 77.8 1 Archaea   Thermoproteati Candidatus Brockarchaeota         Candidatus Brockarchaeota archaeon
29214112 29214112 PRJNA1020854_S_NODE_29809_length_189_cov_4.506250_g27045_i0 PRJNA1020854 29809 189 4.50625 8.5168125 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 46.6 7.81e-4   NR MEM0325281.1 3121606 g27045 i0 38.7 0.984126984126984 62 33 98.4 2 187 2 391 447 MEM0325281.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 186 46.6 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
29971695 29971695 PRJNA1020854_S_NODE_41791_length_153_cov_11.717742_g39027_i0 PRJNA1020854 41791 153 11.717742 17.92814526 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 77.4 1.15e-15   NR MCC5994628.1 3121606 g39027 i0 89.7 0.764705882352941 39 4 76.5 0 145 29 128 166 MCC5994628.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 117 77.4 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
30256412 30256412 PRJNA1020854_S_NODE_18292_length_262_cov_5.210300_g15528_i0 PRJNA1020854 18292 262 5.2103 13.650986 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 160 5.04e-47   NR MCC5994609.1 3121606 g15528 i0 89.5 0.984732824427481 86 9 98.5 0 260 3 12 97 MCC5994609.1 PD-(D/E)XK nuclease family protein [Candidatus Aenigmatarchaeota archaeon] diamond 258 160 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
30445803 30445803 PRJNA1020854_S_NODE_33493_length_176_cov_2.360544_g30729_i0 PRJNA1020854 33493 176 2.360544 4.15455744 Thermoproteota archaeon 2056631 Archaea Archaea 75.5 4.08e-14   NR MEM3368530.1 2056631 g30729 i0 86 0.732954545454545 43 6 73.3 0 175 47 80 122 MEM3368530.1 hypothetical protein [Thermoproteota archaeon] diamond 129 75.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30603511 30603511 PRJNA1020854_S_NODE_6533_length_653_cov_4.607372_g4009_i0 PRJNA1020854 6533 653 4.607372 30.08613916 Methanosphaera sp. rholeuAM27 2666342 Archaea Archaea 93.6 3.02e-18   NR RAP51160.1 1945577 g4009 i0 37.1 0.767228177641654 167 97 73.5 3 634 155 257 422 RAP51160.1 MAG: hypothetical protein BZ138_05820 [Methanosphaera sp. rholeuAM270] diamond 501 93.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. rholeuAM270
30666781 30666781 PRJNA1020854_S_NODE_16313_length_285_cov_3.613281_g13549_i0 PRJNA1020854 16313 285 3.613281 10.29785085 Methanothrix sp. 90426 Archaea Archaea 92.4 2.06e-20   NR MDH7597985.1 90426 g13549 i0 50.5 0.978947368421053 93 46 97.9 0 281 3 1 93 MDH7597985.1 serine protease [Methanothrix sp.] diamond 279 92.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
30698346 30698346 PRJNA1020854_S_NODE_31054_length_184_cov_9.690323_g28290_i0 PRJNA1020854 31054 184 9.690323 17.83019432 Thermoproteota archaeon 2056631 Archaea Archaea 100 1.7e-23   NR MDT7864687.1 2056631 g28290 i0 97.9 0.766304347826087 47 1 76.6 0 24 164 278 324 MDT7864687.1 ribonucleotide-diphosphate reductase subunit beta [Thermoproteota archaeon] diamond 141 100 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31354350 31354350 PRJNA1020854_S_NODE_27096_length_201_cov_4.488372_g24332_i0 PRJNA1020854 27096 201 4.488372 9.02162772 Archaea 2157 Archaea Archaea 118 7.759999999999999e-31   NR MCU0642048.1 1906665 g24332 i0 84.8 4.92537313432836 66 10 98.5 0 200 3 189 254 MCU0642048.1 tyrosine-type recombinase/integrase [archaeon] diamond 990 118 1 Archaea               archaeon
31646568 31646568 PRJNA1020854_S_NODE_8117_length_504_cov_3.993684_g5457_i0 PRJNA1020854 8117 504 3.993684 20.12816736 Archaeoglobaceae archaeon 2511821 Archaea Archaea 93.2 9.69e-19   NR MEM1673093.1 2511821 g5457 i0 48.5 1.29761904761905 103 47 58.3 2 79 372 1 102 MEM1673093.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 654 93.2 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
31804810 31804810 PRJNA1020854_S_NODE_24017_length_218_cov_5.439153_g21253_i0 PRJNA1020854 24017 218 5.439153 11.85735354 Thermoproteota archaeon 2056631 Archaea Archaea 101 1.4199999999999999e-25   NR MDT7864681.1 2056631 g21253 i0 89.5 0.784403669724771 57 6 78.4 0 1 171 8 64 MDT7864681.1 hypothetical protein [Thermoproteota archaeon] diamond 171 101 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32152951 32152951 PRJNA1020854_S_NODE_35158_length_170_cov_11.063830_g32394_i0 PRJNA1020854 35158 170 11.06383 18.808511 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 87.8 1.45e-18   NR MCC5994578.1 3121606 g32394 i0 76.8 0.988235294117647 56 8 98.8 1 169 2 69 119 MCC5994578.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 168 87.8 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;