RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020854", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1020854 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5263984 5263984 PRJNA1020854_S_NODE_36365_length_167_cov_2.644928_g33601_i0 PRJNA1020854 36365 167 2.644928 4.41702976 Ripachij virus 3130407 Viruses Viruses 75 2.99e-9   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g33601 i0 100 0.239520958083832 40 0 24 0 128 167 325 364 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 40 75 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus
11639841 11639841 PRJNA1020854_S_NODE_5030_length_956_cov_8.225458_g2828_i0 PRJNA1020854 5030 956 8.225458 78.63537848 Botourmiaviridae sp. 2808997 Viruses Viruses 473 1.74e-128   NTclustered gi|2320142628|gb|ON585088.1| 2808997 g2828 i0 81.5 0.627615062761506 600 89 62 20 12 599 2541 1952 MAG: Botourmiaviridae sp. isolate PMS2_Contig239 RNA-dependent RNA polymerase gene, complete cds blastn 600 473 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;