RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1020854" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1020854 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3987930 3987930 PRJNA1020854_S_NODE_7344_length_562_cov_1058.953096_g4734_i0 PRJNA1020854 7344 562 1058.953096 5951.31639952 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 255 3.75e-83   NR MDR3612433.1 2364082 g4734 i0 76.5 1.72419928825623 162 37 85.9 1 489 7 18 179 MDR3612433.1 response regulator transcription factor [Candidatus Obscuribacterales bacterium] diamond 969 255 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30382865 30382865 PRJNA1020854_S_NODE_42593_length_152_cov_2.008130_g39829_i0 PRJNA1020854 42593 152 2.00813 3.0523576 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 48.1 1.15e-4   NR MFN8659968.1 2364082 g39829 i0 59 0.769736842105263 39 16 77 0 146 30 202 240 MFN8659968.1 class I SAM-dependent methyltransferase [Candidatus Obscuribacterales bacterium] diamond 117 48.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31646563 31646563 PRJNA1020854_S_NODE_39457_length_159_cov_2.153846_g36693_i0 PRJNA1020854 39457 159 2.153846 3.42461514 Candidatus Melainabacteria bacterium RIFCSPHIGHO2_ 2052166 Bacteria Bacteria 74.7 4.1e-14   NR OGI18471.1 1801607 g36693 i0 78.3 0.867924528301887 46 10 86.8 0 1 138 241 286 OGI18471.1 MAG: hypothetical protein A3B68_06925 [Candidatus Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12] diamond 138 74.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium RIFCSPHIGHO2_02_FULL_34_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;