RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020854", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1020854 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9088356 9088356 PRJNA1020854_S_NODE_18968_length_255_cov_1438.150442_g16204_i0 PRJNA1020854 18968 255 1438.150442 3667.2836271 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 366 7.28e-97   NTclustered gi|820695469|tpe|LN714488.1| 572307 g16204 i0 100 180.6 198 0 78 0 1 198 157188 157385 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 46053 366 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18012535 18012535 PRJNA1020854_S_NODE_16655_length_280_cov_2203.111554_g13891_i0 PRJNA1020854 16655 280 2203.111554 6168.7123512 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 309 1.39e-79   NTclustered gi|820695469|tpe|LN714488.1| 572307 g13891 i0 90.909 170.392857142857 231 20 83 1 1 230 300541 300771 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 47710 309 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;