RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020854", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1020854 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30919740 30919740 PRJNA1020854_S_NODE_19874_length_248_cov_2.598174_g17110_i0 PRJNA1020854 19874 248 2.598174 6.44347152 Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 75.9 7.97e-14   NR PIQ86477.1 1974748 g17110 i0 46.6 3.75 73 39 88.3 0 2 220 277 349 PIQ86477.1 MAG: hypothetical protein COV74_04690 [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] diamond 930 75.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Abzuiibacterium Candidatus Abzuiibacterium crystallinum
31891991 31891991 PRJNA1020854_S_NODE_36757_length_166_cov_2.459854_g33993_i0 PRJNA1020854 36757 166 2.459854 4.08335764 PVC group 1783257 Bacteria Bacteria 47 4.3e-4   NR MFH0839481.1 2035772 g33993 i0 47.7 4.91566265060241 44 23 79.5 0 150 19 1160 1203 MFH0839481.1 DNA polymerase III subunit alpha [Candidatus Omnitrophota bacterium] diamond 816 47 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;