RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020854", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1020854 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12914592 12914592 PRJNA1020854_S_NODE_24751_length_213_cov_9801.510870_g21987_i0 PRJNA1020854 24751 213 9801.51087 20877.2181531 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 82.4 2.39e-11   NTclustered gi|1191042968|ref|XM_021043308.1| 2652724 g21987 i0 93.103 12.2159624413146 58 1 26 2 1 55 3 60 PREDICTED: Exaiptasia diaphana uncharacterized skeletal organic matrix protein 2 (LOC110237692), mRNA blastn 2602 82.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
20129876 20129876 PRJNA1020854_S_NODE_8676_length_470_cov_1269.743764_g5991_i0 PRJNA1020854 8676 470 1269.743764 5967.7956908 Ceratonova 1524939 Cnidaria other_Eukaryota 121 1.24e-22   NTclustered gi|237512525|gb|FJ981818.1| 60662 g5991 i0 83.846 92.931914893617 130 17 27 4 202 330 1920 2046 Ceratomyxa shasta 28S large subunit ribosomal RNA gene, partial sequence blastn 43678 121 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratonova Ceratonova shasta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;