RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1020854", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1020854 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11639467 11639467 PRJNA1020854_S_NODE_22510_length_227_cov_2625.944444_g19746_i0 PRJNA1020854 22510 227 2625.944444 5960.89388788 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 125 7.019999999999998e-32   NR GIV56066.1 2447898 g19746 i0 98.4 0.806167400881057 61 1 80.6 0 185 3 302 362 GIV56066.1 MAG: UDP-N-acetylmuramate--L-alanine ligase [Candidatus Kapaibacterium sp.] diamond 183 125 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27540524 27540524 PRJNA1020854_S_NODE_16004_length_289_cov_3.965385_g13240_i0 PRJNA1020854 16004 289 3.965385 11.45996265 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 182 4.37e-53   NR GIV56066.1 2447898 g13240 i0 94.7 0.986159169550173 95 5 98.6 0 287 3 391 485 GIV56066.1 MAG: UDP-N-acetylmuramate--L-alanine ligase [Candidatus Kapaibacterium sp.] diamond 285 182 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32847583 32847583 PRJNA1020854_S_NODE_20100_length_246_cov_3.382488_g17336_i0 PRJNA1020854 20100 246 3.382488 8.32092048 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 150 7.05e-40   NR GIV49607.1 2447898 g17336 i0 91.4 2.96341463414634 81 7 98.8 0 245 3 1051 1131 GIV49607.1 MAG: hypothetical protein KatS3mg038_0128 [Candidatus Kapaibacterium sp.] diamond 729 150 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;