RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where bioproject = "PRJNA1020854" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 24 ✖

bioproject 1

  • PRJNA1020854 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1435757 1435757 PRJNA1020854_S_NODE_27642_length_199_cov_2.788235_g24878_i0 PRJNA1020854 27642 199 2.788235 5.54858765 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 139 1.29e-28   NTclustered gi|2874253817|emb|OY969801.1| 2212470 g24878 i0 84.028 15.3266331658291 144 23 72 0 1 144 1374301 1374444 MAG: Candidatus Eisenbacteria bacterium isolate MFD10007.bin.c.4 genome assembly, chromosome: 1 blastn 3050 139 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
2278323 2278323 PRJNA1020854_S_NODE_20062_length_246_cov_4.903226_g17298_i0 PRJNA1020854 20062 246 4.903226 12.06193596 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 119 5.63e-30   NR OYX53893.1 1970481 g17298 i0 75.7 1.80487804878049 74 18 90.2 0 231 10 132 205 OYX53893.1 MAG: hypothetical protein B7Y92_01135 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 444 119 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
9088199 9088199 PRJNA1020854_S_NODE_12048_length_356_cov_1534.131498_g9286_i0 PRJNA1020854 12048 356 1534.131498 5461.50813288 Candidatus Nanosynbacter sp. HMT-352 2899133 Bacteria Bacteria 525 1.6499999999999994e-144   NTclustered gi|2218409032|gb|CP089290.1| 2899133 g9286 i0 98.02 46.8539325842697 303 5 85 1 1 302 653357 653659 Candidatus Nanosynbacter sp. HMT-352 strain TM7-001 chromosome blastn 16680 525 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-352
10363864 10363864 PRJNA1020854_S_NODE_12789_length_340_cov_1767.032154_g10025_i0 PRJNA1020854 12789 340 1767.032154 6007.9093236 Bacteria 2 Bacteria Bacteria 83.6 5.46e-16   NR OYX53335.1 1970481 g10025 i0 61.5 2.38235294117647 65 25 57.4 0 5 199 509 573 OYX53335.1 MAG: cell division protein FtsH [Candidatus Saccharibacteria bacterium 32-50-13] diamond 810 84.3 0.991696322657177 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
10363891 10363891 PRJNA1020854_S_NODE_14369_length_312_cov_1824.176678_g11605_i0 PRJNA1020854 14369 312 1824.176678 5691.43123536 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 131 4.459999999999999e-34   NR OYX53988.1 1970481 g11605 i0 70.2 3.90384615384615 84 25 80.8 0 56 307 327 410 OYX53988.1 MAG: hypothetical protein B7Y92_01020 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 1218 131 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
15463628 15463628 PRJNA1020854_S_NODE_23513_length_221_cov_8.557292_g20749_i0 PRJNA1020854 23513 221 8.557292 18.91161532 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 139 1.46e-28   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g20749 i0 80.105 1.23981900452489 191 34 86 4 1 190 382326 382139 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 274 139 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
19286895 19286895 PRJNA1020854_S_NODE_42596_length_152_cov_2.000000_g39832_i0 PRJNA1020854 42596 152 2 3.04 Candidatus Berkelbacteria bacterium 2053521 Bacteria Bacteria 62.1 2.06e-5   NTclustered gi|1950820483|gb|CP066695.1| 2053521 g39832 i0 88.235 1.84210526315789 51 6 34 0 4 54 767954 768004 Candidatus Berkelbacteria bacterium isolate NC_groundwater_1922_Pr3_S-0.2um_51_5 chromosome blastn 280 62.1 1 Bacteria Bacteria candidate phyla   Candidatus Berkelbacteria         Candidatus Berkelbacteria bacterium
23113647 23113647 PRJNA1020854_S_NODE_8199_length_498_cov_1079.963753_g5533_i0 PRJNA1020854 8199 498 1079.963753 5378.21948994 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 203 1.2100000000000004e-59   NR OYX54089.1 1970481 g5533 i0 71.5 0.825301204819277 137 38 82.5 1 37 447 1 136 OYX54089.1 MAG: hypothetical protein B7Y92_00260 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 411 203 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
26686563 26686563 PRJNA1020854_S_NODE_17461_length_271_cov_3.702479_g14697_i0 PRJNA1020854 17461 271 3.702479 10.03371809 Candidatus Chromulinivoraceae bacterium 2953759 Bacteria Bacteria 142 7.199999999999999e-38   NR HSW77943.1 2953759 g14697 i0 78.7 9.70848708487085 89 19 98.5 0 268 2 164 252 HSW77943.1 ribosome biogenesis GTPase Der [Candidatus Chromulinivoraceae bacterium] diamond 2631 142 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Chromulinivoraceae   Candidatus Chromulinivoraceae bacterium
26749588 26749588 PRJNA1020854_S_NODE_12301_length_351_cov_3.639752_g9538_i0 PRJNA1020854 12301 351 3.639752 12.77552952 Parcubacteria group bacterium GW2 2026774 Bacteria Bacteria 107 2.6999999999999993e-24   NR KKW10958.1 1618852 g9538 i0 65.4 2.06837606837607 78 27 66.7 0 241 8 4 81 KKW10958.1 MAG: Penicillin-binding protein, 1A family [Parcubacteria group bacterium GW2011_GWA2_49_9] diamond 726 107 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWA2_49_9
27192797 27192797 PRJNA1020854_S_NODE_40262_length_157_cov_2.179688_g37498_i0 PRJNA1020854 40262 157 2.179688 3.42211016 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.1 5.15e-7   NR MCK5059559.1 2053589 g37498 i0 51.9 2.98089171974522 52 25 99.4 0 1 156 350 401 MCK5059559.1 ComEC/Rec2 family competence protein [Candidatus Paceibacterota bacterium] diamond 468 55.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27280062 27280062 PRJNA1020854_S_NODE_35703_length_169_cov_2.485714_g32939_i0 PRJNA1020854 35703 169 2.485714 4.20085666 Bacteria 2 Bacteria Bacteria 87.8 1.23e-18   NR MBI3573846.1 2030810 g32939 i0 84.6 3.69230769230769 52 8 92.3 0 168 13 86 137 MBI3573846.1 type II secretion system F family protein [Candidatus Kaiserbacteria bacterium] diamond 624 88.6 0.99097065462754 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
28298152 28298152 PRJNA1020854_S_NODE_25826_length_208_cov_2.324022_g23062_i0 PRJNA1020854 25826 208 2.324022 4.83396576 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 55.8 3.62e-7   NR OYX44163.1 1970479 g23062 i0 40.5 1.06730769230769 74 38 98.1 1 208 5 150 223 OYX44163.1 MAG: hypothetical protein B7Y94_00275 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 222 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
28897983 28897983 PRJNA1020854_S_NODE_18228_length_263_cov_2.760684_g15464_i0 PRJNA1020854 18228 263 2.760684 7.26059892 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 128 4.31e-32   NR OYX53625.1 1970481 g15464 i0 73.8 0.958174904942966 84 22 95.8 0 1 252 166 249 OYX53625.1 MAG: hypothetical protein B7Y92_02140 [Candidatus Saccharibacteria bacterium 32-50-13] diamond 252 128 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
29079868 29079868 PRJNA1020854_S_NODE_42008_length_153_cov_2.709677_g39244_i0 PRJNA1020854 42008 153 2.709677 4.14580581 Bacteria 2 Bacteria Bacteria 74.3 3.98e-15   NR MEK7128867.1 2052139 g39244 i0 72.3 4.6078431372549 47 13 92.2 0 141 1 54 100 MEK7128867.1 SsrA-binding protein SmpB [Patescibacteria group bacterium] diamond 705 74.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29584656 29584656 PRJNA1020854_S_NODE_34950_length_171_cov_3.359155_g32186_i0 PRJNA1020854 34950 171 3.359155 5.74415505 Bacteria 2 Bacteria Bacteria 94.7 7.04e-21   NR NQV00833.1 2026774 g32186 i0 87.5 16.6842105263158 56 7 98.2 0 171 4 961 1016 NQV00833.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein [Parcubacteria group bacterium] diamond 2853 94.7 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium
30003430 30003430 PRJNA1020854_S_NODE_16951_length_277_cov_3.866935_g14187_i0 PRJNA1020854 16951 277 3.866935 10.71140995 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 83.6 2.38e-16   NR MSR71024.1 2030810 g14187 i0 79.2 0.51985559566787 48 10 52 0 275 132 579 626 MSR71024.1 M13 family peptidase [Candidatus Kaiserbacteria bacterium] diamond 144 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
30192789 30192789 PRJNA1020854_S_NODE_17712_length_268_cov_4.615063_g14948_i0 PRJNA1020854 17712 268 4.615063 12.36836884 Candidatus Liptonbacteria bacterium 2528273 Bacteria Bacteria 86.7 1.56e-17   NR MBI1960851.1 2528273 g14948 i0 50 3.59328358208955 84 42 94 0 17 268 1 84 MBI1960851.1 glycosyltransferase family 39 protein [Candidatus Liptonbacteria bacterium] diamond 963 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Liptoniibacteriota         Candidatus Liptonbacteria bacterium
30351393 30351393 PRJNA1020854_S_NODE_29812_length_189_cov_4.406250_g27048_i0 PRJNA1020854 29812 189 4.40625 8.3278125 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 53.1 3.52e-6   NR QQS17319.1 2026720 g27048 i0 88.9 0.857142857142857 27 3 42.9 0 107 187 1 27 QQS17319.1 MAG: thymidylate synthase [Candidatus Saccharibacteria bacterium] diamond 162 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30729956 30729956 PRJNA1020854_S_NODE_16454_length_283_cov_4.637795_g13690_i0 PRJNA1020854 16454 283 4.637795 13.12495985 Patescibacteria group bacterium 2052139 Bacteria Bacteria 100 4.1200000000000003e-22   NR MBU4351424.1 2052139 g13690 i0 73.5 0.720848056537102 68 18 72.1 0 224 21 1099 1166 MBU4351424.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein [Patescibacteria group bacterium] diamond 204 100 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31362253 31362253 PRJNA1020854_S_NODE_33716_length_175_cov_3.184932_g30952_i0 PRJNA1020854 33716 175 3.184932 5.573631 Candidatus Saccharibacteria bacterium 32-49-1 1970478 Bacteria Bacteria 52.4 1.86e-6   NR OYW85912.1 1970478 g30952 i0 59.1 0.754285714285714 44 18 75.4 0 168 37 24 67 OYW85912.1 MAG: hypothetical protein B7Z17_01450 [Candidatus Saccharibacteria bacterium 32-49-10] diamond 132 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-10
31638825 31638825 PRJNA1020854_S_NODE_21736_length_233_cov_3.823529_g18972_i0 PRJNA1020854 21736 233 3.823529 8.90882257 Pseudomonadati 3379134 Bacteria Bacteria 79.3 3.84e-15   NR MDN5274836.1 2026720 g18972 i0 75 6.90128755364807 52 13 67 0 77 232 56 107 MDN5274836.1 recombination factor protein RarA [Candidatus Saccharibacteria bacterium] diamond 1608 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31765388 31765388 PRJNA1020854_S_NODE_16097_length_288_cov_3.876448_g13333_i0 PRJNA1020854 16097 288 3.876448 11.16417024 Bacteria 2 Bacteria Bacteria 144 1.5199999999999996e-38   NR NCU38425.1 2026720 g13333 i0 83.5 16.8541666666667 85 14 88.5 0 3 257 276 360 NCU38425.1 ribosome biogenesis GTPase Der [Candidatus Saccharibacteria bacterium] diamond 4854 144 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32121475 32121475 PRJNA1020854_S_NODE_14818_length_305_cov_5.141304_g12054_i0 PRJNA1020854 14818 305 5.141304 15.6809772 Candidatus Saccharibacteria bacterium 32-5 1970481 Bacteria Bacteria 167 2.55e-48   NR OYX53316.1 1970481 g12054 i0 87 6.69836065573771 100 13 98.4 0 6 305 35 134 OYX53316.1 MAG: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Candidatus Saccharibacteria bacterium 32-50-13] diamond 2043 167 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;