RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32248169 32248169 PRJNA1020641_P_NODE_2458_length_390_cov_0.971609_g2415_i0 PRJNA1020641 2458 390 0.971609 3.7892751 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 195 1.19e-57   NR KAK8835452.1 1915356 g2415 i0 76.9 1 130 30 100 0 1 390 275 404 KAK8835452.1 hypothetical protein M9Y10_004556 [Tritrichomonas musculus] diamond 390 195 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
32721705 32721705 PRJNA1020641_P_NODE_6900_length_244_cov_0.900585_g6857_i0 PRJNA1020641 6900 244 0.900585 2.1974274 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52 2.14e-5   NR XP_067772801.1 135588 g6857 i0 52.1 1.10655737704918 48 22 59 1 94 237 172 218 XP_067772801.1 uncharacterized protein GO595_007282 [Histomonas meleagridis] diamond 270 52 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;