RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28203270 28203270 PRJNA1020641_P_NODE_6566_length_246_cov_0.890173_g6523_i0 PRJNA1020641 6566 246 0.890173 2.18982558 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.1 0.0278   NR MCJ7432198.1 2073117 g6523 i0 32.5 0.939024390243902 77 41 80.5 2 203 6 274 350 MCJ7432198.1 M3 family oligoendopeptidase [Anaerolineales bacterium] diamond 231 43.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31899795 31899795 PRJNA1020641_P_NODE_5757_length_250_cov_0.870056_g5714_i0 PRJNA1020641 5757 250 0.870056 2.17514 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 124 1.42e-32   NR MBQ4513671.1 2024896 g5714 i0 71.3 0.96 80 23 96 0 2 241 102 181 MBQ4513671.1 hypothetical protein [Anaerolineaceae bacterium] diamond 240 124 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;