RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1020641", tax_phylum = "Apicomplexa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4831022 4831022 PRJNA1020641_P_NODE_5424_length_253_cov_1.038889_g5381_i0 PRJNA1020641 5424 253 1.038889 2.62838917 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 104 6.25e-18   NTclustered gi|67583011|ref|XM_659868.1| 353151 g5381 i0 90.123 0.640316205533597 81 7 32 1 83 163 538 459 Cryptosporidium hominis TU502 cytoplasmic dynein 1-related (Chro.10093) partial mRNA blastn 162 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
27848224 27848224 PRJNA1020641_P_NODE_6104_length_248_cov_0.880000_g6061_i0 PRJNA1020641 6104 248 0.88 2.1824 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 51.2 4.06e-5   NR XP_038969828.1 5851 g6061 i0 47.7 4.18548387096774 44 23 53.2 0 90 221 135 178 XP_038969828.1 geranylgeranyl transferase type-2 subunit alpha, putative [Plasmodium knowlesi strain H] diamond 1038 51.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
30288038 30288038 PRJNA1020641_P_NODE_5672_length_251_cov_0.865169_g5629_i0 PRJNA1020641 5672 251 0.865169 2.17157419 Babesia microti strain RI 1133968 SAR_Eukaryotes SAR_Eukaryotes 75.9 8.92e-14   NR XP_012648258.1 1133968 g5629 i0 47.1 1.64940239043825 70 37 83.7 0 1 210 107 176 XP_012648258.1 Calcineurin-like phosphoesterase [Babesia microti strain RI] diamond 414 75.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
31298761 31298761 PRJNA1020641_P_NODE_6835_length_244_cov_0.900585_g6792_i0 PRJNA1020641 6835 244 0.900585 2.1974274 Plasmodium inui San Antonio 1 1237626 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0393   NR XP_008817446.1 1237626 g6792 i0 32.7 0.676229508196721 55 37 67.6 0 74 238 1448 1502 XP_008817446.1 hypothetical protein C922_03632 [Plasmodium inui San Antonio 1] diamond 165 42.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;