RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641", tax_kingdom = "Viridiplantae" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 2 ✖

tax_kingdom 1

  • Viridiplantae · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31646547 31646547 PRJNA1020641_P_NODE_5577_length_251_cov_0.865169_g5534_i0 PRJNA1020641 5577 251 0.865169 2.17157419 Astrephomene gubernaculifera 47775 Plants Plants 61.6 9.31e-9   NR GFR44406.1 47775 g5534 i0 63.2 1.33864541832669 38 14 45.4 0 106 219 6 43 GFR44406.1 hypothetical protein Agub_g5638, partial [Astrephomene gubernaculifera] diamond 336 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
32121470 32121470 PRJNA1020641_P_NODE_4098_length_300_cov_1.356828_g4055_i0 PRJNA1020641 4098 300 1.356828 4.070484 Chlorella ohadii 2649997 Plants Plants 88.2 8.25e-18   NR KAI7840758.1 2649997 g4055 i0 47.5 4.95 99 42 99 1 3 299 2798 2886 KAI7840758.1 hypothetical protein COHA_005572 [Chlorella ohadii] diamond 1485 88.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella ohadii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;