RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1020641", tax_kingdom = "Metazoa" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12914266 12914266 PRJNA1020641_P_NODE_1371_length_518_cov_0.865169_g1329_i0 PRJNA1020641 1371 518 0.865169 4.48157542 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 163 2.25e-35   NTclustered gi|2733950925|ref|XM_065460002.1| 3053472 g1329 i0 80.088 2.94208494208494 226 39 43 6 264 486 457 235 PREDICTED: Gordionus sp. m RMFG-2023 serine/threonine-protein phosphatase alpha-2 isoform-like (LOC135924875), mRNA blastn 1524 163 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;