RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1020641", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26805505 26805505 PRJNA1020641_P_NODE_4581_length_282_cov_1.105263_g4538_i0 PRJNA1020641 4581 282 1.105263 3.11684166 Mytilus 6548 Mollusca Mollusca 47 0.00199   NR XP_052105827.1 6549 g4538 i0 34.1 5.80851063829787 91 50 96.8 2 6 278 1408 1488 XP_052105827.1 dynein axonemal heavy chain 6-like isoform X2 [Mytilus californianus] diamond 1638 47 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
27635283 27635283 PRJNA1020641_P_NODE_2704_length_372_cov_1.030100_g2661_i0 PRJNA1020641 2704 372 1.0301 3.831972 Liolophura japonica 13599 Mollusca Mollusca 171 1.9e-46   NR XP_064608081.1 13599 g2661 i0 65.8 0.967741935483871 120 36 96.8 2 1 360 108 222 XP_064608081.1 serine/threonine-protein kinase dst1-like isoform X2 [Liolophura japonica] diamond 360 171 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
28290300 28290300 PRJNA1020641_P_NODE_6026_length_249_cov_0.875000_g5983_i0 PRJNA1020641 6026 249 0.875 2.17875 Bivalvia 6544 Mollusca Mollusca 87 1.04e-17   NR XP_052816497.1 6604 g5983 i0 59.1 7.80722891566265 66 25 77.1 1 246 55 364 429 XP_052816497.1 lysine--tRNA ligase-like isoform X2 [Mya arenaria] diamond 1944 87.8 0.990888382687927 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;