RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1020641", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7813177 7813177 PRJNA1020641_P_NODE_5967_length_249_cov_0.875000_g5924_i0 PRJNA1020641 5967 249 0.875 2.17875 Tremella fuciformis 64657 Fungi Fungi 132 2.81e-26   NTclustered gi|1279337316|gb|MF422653.1| 64657 g5924 i0 77.578 8.7911646586345409 223 46 89 4 1 221 23272 23052 Tremella fuciformis isolate TF09 mitochondrion, complete genome blastn 2189 132 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Tremellaceae Tremella Tremella fuciformis
16737509 16737509 PRJNA1020641_P_NODE_3414_length_331_cov_1.193798_g3371_i0 PRJNA1020641 3414 331 1.193798 3.95147138 Eukaryota 2759 Fungi Fungi 173 4.47e-49   NR KAG7531312.1 5210 g3371 i0 74.5 139.577039274924 110 28 99.7 0 330 1 253 362 KAG7531312.1 hypothetical protein FFLO_04433 [Filobasidium floriforme] diamond 46200 173 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
21405107 21405107 PRJNA1020641_P_NODE_5377_length_254_cov_1.569061_g5334_i0 PRJNA1020641 5377 254 1.569061 3.98541494 Malassezia 55193 Fungi Fungi 470 5.37e-128   NTclustered gi|724086716|gb|KM269140.1| 76773 g5334 i0 100 99.248031496063 254 0 100 0 1 254 905 1158 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25209 470 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
27563974 27563974 PRJNA1020641_P_NODE_4544_length_283_cov_1.100000_g4501_i0 PRJNA1020641 4544 283 1.1 3.113 Fungi 4751 Fungi Fungi 64.3 1.55e-9   NR KAI0356078.1 575983 g4501 i0 36.5 6.51943462897527 85 50 88 2 283 35 506 588 KAI0356078.1 WD40 repeat-like protein [Trametes cingulata] diamond 1845 64.7 0.993817619783617 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes cingulata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;