RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27540519 27540519 PRJNA1020641_P_NODE_6824_length_244_cov_0.900585_g6781_i0 PRJNA1020641 6824 244 0.900585 2.1974274 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 155 6.629999999999998e-42   NR MBR4654664.1 2212473 g6781 i0 84 0.995901639344262 81 13 99.6 0 1 243 925 1005 MBR4654664.1 VCBS repeat-containing protein [Kiritimatiellia bacterium] diamond 243 155 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32089629 32089629 PRJNA1020641_P_NODE_5638_length_251_cov_0.865169_g5595_i0 PRJNA1020641 5638 251 0.865169 2.17157419 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 154 7.25e-42   NR MBR4653206.1 2212473 g5595 i0 89.2 0.99203187250996006 83 9 99.2 0 250 2 262 344 MBR4653206.1 Na-K-Cl cotransporter [Kiritimatiellia bacterium] diamond 249 154 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;