RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26813394 26813394 PRJNA1020641_P_NODE_4381_length_289_cov_1.111111_g4338_i0 PRJNA1020641 4381 289 1.111111 3.21111079 Dentiscutata heterogama 1316150 Fungi Fungi 64.7 3.56e-10   NR CAG8661847.1 1316150 g4338 i0 42.6 0.975778546712803 94 51 94.5 2 15 287 87 180 CAG8661847.1 5324_t:CDS:2, partial [Dentiscutata heterogama] diamond 282 64.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Dentiscutata Dentiscutata heterogama
32595864 32595864 PRJNA1020641_P_NODE_7260_length_242_cov_0.911243_g7217_i0 PRJNA1020641 7260 242 0.911243 2.20520806 Funneliformis geosporum 1117311 Fungi Fungi 48.1 4.46e-4   NR CAI2172969.1 1117311 g7217 i0 47.1 0.632231404958678 51 26 63.2 1 2 154 207 256 CAI2172969.1 11545_t:CDS:2 [Funneliformis geosporum] diamond 153 48.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis geosporum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;