RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2710934 2710934 PRJNA1020641_P_NODE_5063_length_265_cov_1.171875_g5020_i0 PRJNA1020641 5063 265 1.171875 3.10546875 Decastava sp. 3023511 Euglenozoa other_Eukaryota 468 2.03e-127   NTclustered gi|2431695564|gb|OQ331009.1| 3023511 g5020 i0 98.491 55.9584905660377 265 4 100 0 1 265 1737 1473 Decastava sp. isolate SPO2 small subunit ribosomal RNA gene, partial sequence blastn 14829 468 1 Eukaryota Discoba   Euglenozoa Euglenida     Decastava Decastava sp.
20561728 20561728 PRJNA1020641_P_NODE_4817_length_273_cov_1.155000_g4774_i0 PRJNA1020641 4817 273 1.155 3.15315 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 252 2.3e-62   NTclustered gi|2228698|gb|U84731.1|PCU84731 56452 g4774 i0 96.104 52.4542124542125 154 6 56 0 120 273 1884 1731 Petalomonas cantuscygni small subunit ribosomal RNA gene, complete sequence blastn 14320 252 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;