RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1020641", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1020641 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30224377 30224377 PRJNA1020641_P_NODE_3272_length_339_cov_1.109023_g3229_i0 PRJNA1020641 3272 339 1.109023 3.75958797 Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_ 1802312 Bacteria Bacteria 44.3 0.0212   NR OHA27170.1 1802312 g3229 i0 38 0.699115044247788 79 44 69 3 12 245 98 172 OHA27170.1 MAG: hypothetical protein A3C06_03790 [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13] diamond 237 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;