RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1020641", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27216502 27216502 PRJNA1020641_P_NODE_5742_length_250_cov_0.870056_g5699_i0 PRJNA1020641 5742 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 91.7 2.53e-19   NR KKT22313.1 1618779 g5699 i0 60.5 3.9 81 32 97.2 0 243 1 721 801 KKT22313.1 MAG: hypothetical protein UW07_C0039G0021 [Candidatus Nomurabacteria bacterium GW2011_GWF2_43_8] diamond 975 92 0.996739130434783 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWF2_43_8
27761733 27761733 PRJNA1020641_P_NODE_7224_length_242_cov_0.911243_g7181_i0 PRJNA1020641 7224 242 0.911243 2.20520806 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 88.2 3.58e-18   NR MCX6751953.1 2052152 g7181 i0 59.7 2.87603305785124 77 31 95.5 0 10 240 137 213 MCX6751953.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 696 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;