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contig_metadata

6 rows where bioproject = "PRJNA1016321" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1016321 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8655930 8655930 PRJNA1016321_P_NODE_53307_length_244_cov_1.444444_g53076_i0 PRJNA1016321 53307 244 1.444444 3.52444336 Halalkalicoccus 332246 Archaea Archaea 368 1.92e-97   NTclustered gi|507148368|ref|NR_103171.1| 413810 g53076 i0 94.894 164.737704918033 235 12 96 0 1 235 370 604 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 40196 368 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
9930812 9930812 PRJNA1016321_P_NODE_38968_length_284_cov_1.696682_g38737_i0 PRJNA1016321 38968 284 1.696682 4.81857688 Halalkalicoccus 332246 Archaea Archaea 492 1.2999999999999999e-134   NTclustered gi|507148368|ref|NR_103171.1| 413810 g38737 i0 97.887 164.904929577465 284 6 100 0 1 284 945 662 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 46833 492 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
9930846 9930846 PRJNA1016321_P_NODE_56868_length_236_cov_2.656442_g56637_i0 PRJNA1016321 56868 236 2.656442 6.26920312 Halalkalicoccus 332246 Archaea Archaea 359 1.1099999999999999e-94   NTclustered gi|507148368|ref|NR_103171.1| 413810 g56637 i0 94.068 138.622881355932 236 14 100 0 1 236 1457 1692 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 32715 359 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
28953730 28953730 PRJNA1016321_P_NODE_40148_length_279_cov_3.538835_g39917_i0 PRJNA1016321 40148 279 3.538835 9.87334965 Halalkalicoccus 332246 Archaea Archaea 149 2.5299999999999993e-42   NR WP_008418065.1 413810 g39917 i0 79.8 3.82795698924731 89 18 95.7 0 269 3 47 135 WP_008418065.1 urease accessory protein UreD [Halalkalicoccus jeotgali] diamond 1068 149 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
29877043 29877043 PRJNA1016321_P_NODE_51151_length_247_cov_0.885057_g50920_i0 PRJNA1016321 51151 247 0.885057 2.18609079 Nitrososphaera sp. 1971748 Archaea Archaea 119 1.33e-29   NR MCI0563357.1 1971748 g50920 i0 65 0.97165991902834 80 28 97.2 0 1 240 262 341 MCI0563357.1 SNF2-related protein [Nitrososphaera sp.] diamond 240 119 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32879048 32879048 PRJNA1016321_P_NODE_48220_length_250_cov_3.282486_g47989_i0 PRJNA1016321 48220 250 3.282486 8.206215 Nanobdellota archaeon 2026764 Archaea Archaea 117 8.83e-29   NR MDO8508835.1 2026764 g47989 i0 77.9 0.924 77 17 92.4 0 18 248 359 435 MDO8508835.1 proline--tRNA ligase [Nanoarchaeota archaeon] diamond 231 117 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;