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contig_metadata

7 rows where bioproject = "PRJNA1016321", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1016321 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2277846 2277846 PRJNA1016321_P_NODE_102_length_3038_cov_8.709612_g90_i0 PRJNA1016321 102 3038 8.709612 264.59801256 Respirovirus 186938 Viruses Viruses 5566 0   NTclustered gi|60898|emb|X03614.1| 12730 g90 i0 99.737 45.7314022383147 3039 6 100 2 1 3038 3315 278 Sendai virus (strain Z) genome RNA 5'end blastn 138932 5566 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
9087654 9087654 PRJNA1016321_P_NODE_8_length_6986_cov_38.244756_g6_i0 PRJNA1016321 8 6986 38.244756 2671.77865416 Respirovirus muris 3052731 Viruses Viruses 8661 0   NTclustered gi|546225824|dbj|AB855655.1| 3052731 g6 i0 99.725 50.150014314343 4730 12 99 1 2207 6936 4842 114 Respirovirus muris genomic RNA, complete genome, strain: Z blastn 350348 8661 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus muris
10362452 10362452 PRJNA1016321_P_NODE_17309_length_466_cov_1.997455_g17079_i0 PRJNA1016321 17309 466 1.997455 9.3081403 Respirovirus muris 3052731 Viruses Viruses 850 0   NTclustered gi|546225824|dbj|AB855655.1| 3052731 g17079 i0 99.571 40.8669527896996 466 2 100 0 1 466 10375 9910 Respirovirus muris genomic RNA, complete genome, strain: Z blastn 19044 850 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus muris
22679521 22679521 PRJNA1016321_P_NODE_23438_length_386_cov_2.920128_g23207_i0 PRJNA1016321 23438 386 2.920128 11.27169408 Respirovirus 186938 Viruses Viruses 713 0   NTclustered gi|60898|emb|X03614.1| 12730 g23207 i0 100 37.7512953367876 386 0 100 0 1 386 6177 5792 Sendai virus (strain Z) genome RNA 5'end blastn 14572 713 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
23955056 23955056 PRJNA1016321_P_NODE_34919_length_303_cov_4.765217_g34688_i0 PRJNA1016321 34919 303 4.765217 14.43860751 Respirovirus 186938 Viruses Viruses 560 3.79e-155   NTclustered gi|60898|emb|X03614.1| 12730 g34688 i0 100 35.2376237623762 303 0 100 0 1 303 17 319 Sendai virus (strain Z) genome RNA 5'end blastn 10677 560 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
28171865 28171865 PRJNA1016321_P_NODE_17966_length_456_cov_1.746736_g17736_i0 PRJNA1016321 17966 456 1.746736 7.96511616 Grapevine wood holobiome associated mononegaambi virus 1 3385175 Viruses Viruses 63.5 9.58e-9   NR XLV09863.1 3385175 g17736 i0 38.3 1.06578947368421 81 50 53.3 0 442 200 180 260 XLV09863.1 hypothetical protein [Grapevine wood holobiome associated mononegaambi virus 1] diamond 486 63.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales     Grapevine wood holobiome associated mononegaambi virus 1
29908681 29908681 PRJNA1016321_P_NODE_4431_length_966_cov_2.893617_g4260_i0 PRJNA1016321 4431 966 2.893617 27.95234022 Plasmopara viticola lesion associated mononegaambi virus 9 2692021 Viruses Viruses 130 1.8799999999999998e-32   NR WKE35292.1 2692021 g4260 i0 42.1 0.493788819875776 159 92 49.4 0 785 309 4 162 WKE35292.1 hypothetical protein [Plasmopara viticola lesion associated mononegaambi virus 9] diamond 477 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Penicillimonavirus Penicillimonavirus etaplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;