RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1016321" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1016321 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26781789 26781789 PRJNA1016321_P_NODE_42841_length_268_cov_4.717949_g42610_i0 PRJNA1016321 42841 268 4.717949 12.64410332 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 82.8 5.93e-18   NR MBP6343092.1 2035772 g42610 i0 86.4 0.492537313432836 44 6 49.3 0 263 132 89 132 MBP6343092.1 response regulator [Candidatus Omnitrophota bacterium] diamond 132 82.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28890235 28890235 PRJNA1016321_P_NODE_15188_length_503_cov_2.160465_g14959_i0 PRJNA1016321 15188 503 2.160465 10.86713895 PVC group 1783257 Bacteria Bacteria 113 8.98e-26   NR MCK9603241.1 2035772 g14959 i0 39.6 1.96819085487078 164 88 96 4 21 503 170 325 MCK9603241.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 990 113 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;