RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1016321", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1016321 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6538330 6538330 PRJNA1016321_P_NODE_8766_length_685_cov_5.482026_g8557_i0 PRJNA1016321 8766 685 5.482026 37.5518781 Rhizophagus irregularis 588596 Fungi Fungi 73.1 5.25e-8   NTclustered gi|2749810774|ref|XM_025314455.2| 588596 g8557 i0 93.878 3.72408759124088 49 2 7 1 227 275 462 415 Rhizophagus irregularis uncharacterized protein (OCT59_011167), mRNA blastn 2551 73.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
30595648 30595648 PRJNA1016321_P_NODE_22233_length_400_cov_1.492355_g22002_i0 PRJNA1016321 22233 400 1.492355 5.96942 root 1 Root_unresolved Root_unresolved 47.8 0.00344   NR KAG0259006.1 41804 g22002 i0 30.8 2.505 120 74 85.5 3 342 1 117 233 KAG0259006.1 hypothetical protein BG011_002869 [Mortierella polycephala] diamond 1002 47.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella polycephala
32650661 32650661 PRJNA1016321_P_NODE_10580_length_617_cov_5.724265_g10358_i0 PRJNA1016321 10580 617 5.724265 35.31871505 Eukaryota 2759 Fungi Fungi 53.1 2.04e-4   NR KAI9020781.1 269771 g10358 i0 45.8 0.938411669367909 59 29 28.7 1 227 403 212 267 KAI9020781.1 DHS-like NAD/FAD-binding domain-containing protein [Phycomyces nitens] diamond 579 53.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces nitens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;