RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1013345" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1013345 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29143183 29143183 PRJNA1013345_P_NODE_15089_length_182_cov_1.888889_g14959_i0 PRJNA1013345 15089 182 1.888889 3.43777798 Metazoa 33208 Mollusca Mollusca 79.3 2.09e-15   NR KAL5021841.1 13268 g14959 i0 57.6 4.92857142857143 59 25 97.3 0 5 181 1010 1068 KAL5021841.1 hypothetical protein ScPMuIL_000996 [Solemya velum] diamond 897 79.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
29245463 29245463 PRJNA1013345_P_NODE_26749_length_162_cov_0.886957_g26619_i0 PRJNA1013345 26749 162 0.886957 1.43687034 Gigantopelta aegis 1735272 Mollusca Mollusca 43.1 0.00943   NR XP_041370016.1 1735272 g26619 i0 46.3 1.66666666666667 41 22 75.9 0 123 1 580 620 XP_041370016.1 E3 ubiquitin-protein ligase MIB2-like isoform X1 [Gigantopelta aegis] diamond 270 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;