RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1013345" and tax_phylum = "Candidatus Auribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Auribacterota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1013345 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29813639 29813639 PRJNA1013345_P_NODE_26931_length_161_cov_3.263158_g26801_i0 PRJNA1013345 26931 161 3.263158 5.25368438 Candidatus Theseobacter exili 3039698 Bacteria Bacteria 40.8 0.0149   NR MDP8219236.1 3039698 g26801 i0 45.9 0.68944099378882 37 20 68.9 0 141 31 6 42 MDP8219236.1 YkgJ family cysteine cluster protein [Candidatus Theseobacter exili] diamond 111 40.8 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota Candidatus Auribacteria Candidatus Theseobacterales Candidatus Theseobacteraceae Candidatus Theseobacter Candidatus Theseobacter exili

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;