RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1013345" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1013345 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30414302 30414302 PRJNA1013345_P_NODE_15713_length_181_cov_1.313433_g15583_i0 PRJNA1013345 15713 181 1.313433 2.37731373 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 95.5 3.2199999999999993e-24   NR HZA62527.1 2169593 g15583 i0 93.9 0.812154696132597 49 3 81.2 0 3 149 24 72 HZA62527.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 147 95.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30761647 30761647 PRJNA1013345_P_NODE_31734_length_157_cov_1.800000_g31604_i0 PRJNA1013345 31734 157 1.8 2.826 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 57.8 8.02e-9   NR HZA70165.1 2169593 g31604 i0 76.5 1.85350318471338 34 8 65 0 55 156 1 34 HZA70165.1 DUF4437 domain-containing protein [Nitrososphaeraceae archaeon] diamond 291 57.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;