RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1013345", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1013345 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26845231 26845231 PRJNA1013345_P_NODE_31981_length_157_cov_0.927273_g31851_i0 PRJNA1013345 31981 157 0.927273 1.45581861 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 107 2.66e-25   NR MFN3730453.1 2682144 g31851 i0 100 1.98726114649682 52 0 99.4 0 2 157 317 368 MFN3730453.1 type I restriction endonuclease subunit R [Fimbriimonadaceae bacterium] diamond 312 107 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29813636 29813636 PRJNA1013345_P_NODE_15651_length_181_cov_1.522388_g15521_i0 PRJNA1013345 15651 181 1.522388 2.75552228 Armatimonadota bacterium 2033014 Bacteria Bacteria 120 3.52e-30   NR MBC8103748.1 2033014 g15521 i0 98.3 1.97237569060773 60 1 99.4 0 180 1 128 187 MBC8103748.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Armatimonadota bacterium] diamond 357 120 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;