RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1013345", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1013345 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5260937 5260937 PRJNA1013345_P_NODE_11125_length_197_cov_1.993333_g10995_i0 PRJNA1013345 11125 197 1.993333 3.92686601 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 326 9.1e-85   NTclustered gi|820695469|tpe|LN714488.1| 572307 g10995 i0 96.447 4.94416243654822 197 7 100 0 1 197 117536 117732 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 974 326 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
7810998 7810998 PRJNA1013345_P_NODE_30107_length_159_cov_0.910714_g29977_i0 PRJNA1013345 30107 159 0.910714 1.44803526 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 196 5.75e-46   NTclustered gi|820695469|tpe|LN714488.1| 572307 g29977 i0 89.241 2.0062893081761 158 15 100 2 1 157 80658 80502 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 319 196 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11637012 11637012 PRJNA1013345_P_NODE_28290_length_160_cov_1.805310_g28160_i0 PRJNA1013345 28290 160 1.80531 2.888496 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 285 1.2e-72   NTclustered gi|820695469|tpe|LN714488.1| 572307 g28160 i0 98.75 3.55 160 2 100 0 1 160 117549 117390 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 568 285 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21835362 21835362 PRJNA1013345_P_NODE_7018_length_235_cov_0.978723_g6888_i0 PRJNA1013345 7018 235 0.978723 2.29999905 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 209 1.18e-49   NTclustered gi|820695469|tpe|LN714488.1| 572307 g6888 i0 88.439 27.7446808510638 173 20 99 0 19 191 301089 301261 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 6520 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;