RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1013345" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA1013345 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3985072 3985072 PRJNA1013345_P_NODE_8104_length_222_cov_1.434286_g7974_i0 PRJNA1013345 8104 222 1.434286 3.18411492 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 366 6.19e-97   NTclustered gi|2031939004|emb|OD957472.1| 5763 g7974 i0 96.396 8.86036036036036 222 8 100 0 1 222 917 1138 Naegleria fowleri Karachi_NF001 strain blastn 1967 366 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27540505 27540505 PRJNA1013345_P_NODE_25044_length_163_cov_1.758621_g24914_i0 PRJNA1013345 25044 163 1.758621 2.86655223 Trypanosoma rangeli SC58 429131 Euglenozoa other_Eukaryota 42.7 0.00963   NR ESL05026.1 429131 g24914 i0 66.7 0.496932515337423 27 9 49.7 0 81 161 43 69 ESL05026.1 hypothetical protein TRSC58_07379 [Trypanosoma rangeli SC58] diamond 81 42.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
29655475 29655475 PRJNA1013345_P_NODE_17330_length_177_cov_2.146154_g17200_i0 PRJNA1013345 17330 177 2.146154 3.79869258 Acrasis kona 1008807 Heterolobosea other_Eukaryota 78.6 3.54e-15   NR KAL0488150.1 1008807 g17200 i0 72 0.847457627118644 50 14 84.7 0 8 157 57 106 KAL0488150.1 hypothetical protein AKO1_008938 [Acrasis kona] diamond 150 78.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30761649 30761649 PRJNA1013345_P_NODE_32314_length_157_cov_0.927273_g32184_i0 PRJNA1013345 32314 157 0.927273 1.45581861 Acrasis kona 1008807 Heterolobosea other_Eukaryota 63.9 3.38e-10   NR KAL0477975.1 1008807 g32184 i0 58.5 0.78343949044586 41 17 78.3 0 154 32 162 202 KAL0477975.1 HET-E1 [Acrasis kona] diamond 123 63.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;