RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1012699" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1012699 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11205703 11205703 PRJNA1012699_P_NODE_2209_length_270_cov_1.934010_g2177_i0 PRJNA1012699 2209 270 1.93401 5.221827 Amphidiscosida 269027 Porifera other_Eukaryota 135 2.39e-27   NTclustered gi|1336429313|gb|MF684000.1| 2079124 g2177 i0 83.916 46.0185185185185 143 22 53 1 3 144 530 672 Hyalonema agassizi voucher SMF12069 28S ribosomal RNA gene, partial sequence blastn 12425 135 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Amphidiscosida Hyalonematidae Hyalonema Hyalonema agassizi
29151069 29151069 PRJNA1012699_P_NODE_4069_length_237_cov_2.243902_g4037_i0 PRJNA1012699 4069 237 2.243902 5.31804774 Corticium candelabrum 121492 Porifera other_Eukaryota 90.5 5.57e-21   NR XP_062509494.1 121492 g4037 i0 80 9.70886075949367 55 11 69.6 0 71 235 20 74 XP_062509494.1 transcription factor BTF3 homolog 4-like [Corticium candelabrum] diamond 2301 90.5 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;