RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1012699", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1012699 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28582497 28582497 PRJNA1012699_P_NODE_2567_length_255_cov_1.604396_g2535_i0 PRJNA1012699 2567 255 1.604396 4.0912098 Coemansia reversa NRRL 1564 763665 Fungi Fungi 42 0.0434   NR PIA13598.1 763665 g2535 i0 35.1 0.670588235294118 57 36 67.1 1 226 56 67 122 PIA13598.1 hypothetical protein COEREDRAFT_11192 [Coemansia reversa NRRL 1564] diamond 171 42 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia reversa
31836297 31836297 PRJNA1012699_P_NODE_917_length_378_cov_1.019672_g885_i0 PRJNA1012699 917 378 1.019672 3.85436016 Dimargaris cristalligena 215637 Fungi Fungi 88.6 6.2e-20   NR KAJ1985471.1 215637 g885 i0 57.5 1.25396825396825 80 34 63.5 0 9 248 22 101 KAJ1985471.1 Non-histone chromosomal protein 6 [Dimargaris cristalligena] diamond 474 88.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dimargaris Dimargaris cristalligena

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;