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contig_metadata

13 rows where bioproject = "PRJNA1012699" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA1012699 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
158032 158032 PRJNA1012699_P_NODE_441_length_513_cov_1.763636_g409_i0 PRJNA1012699 441 513 1.763636 9.04745268 Arachnula sp. CL22 862246 SAR_Eukaryotes SAR_Eukaryotes 359 2.64e-94   NTclustered gi|301014696|gb|GQ377694.1| 862246 g409 i0 88.966 41.140350877193 290 32 57 0 193 482 2 291 Arachnula sp. CL22 ribosomal protein S23a (rps23a) mRNA, partial cds blastn 21105 359 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL22
7380073 7380073 PRJNA1012699_P_NODE_4186_length_221_cov_33.695946_g4154_i0 PRJNA1012699 4186 221 33.695946 74.46804066 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 407 3.63e-109   NTclustered gi|291495599|gb|GU823226.1| 152704 g4154 i0 100 99.5475113122172 220 0 99 0 1 220 841 1060 Uncultured stramenopile clone BCA5F13RJ3F09 18S ribosomal RNA gene, partial sequence blastn 22000 407 1 Eukaryota Sar             uncultured stramenopile
10361255 10361255 PRJNA1012699_P_NODE_2529_length_256_cov_2.530055_g2497_i0 PRJNA1012699 2529 256 2.530055 6.4769408 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 294 3.5e-75   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2497 i0 87.5 99.5234375 256 30 100 2 1 256 1621 1368 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 25478 294 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
10361275 10361275 PRJNA1012699_P_NODE_3689_length_244_cov_0.912281_g3657_i0 PRJNA1012699 3689 244 0.912281 2.22596564 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 125 2.08e-33   NR KUF77207.1 4792 g3657 i0 76.3 17.7049180327869 80 19 98.4 0 242 3 141 220 KUF77207.1 Ras-related GTP-binding protein A [Phytophthora nicotianae] diamond 4320 125 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
19283680 19283680 PRJNA1012699_P_NODE_476_length_498_cov_2.190588_g444_i0 PRJNA1012699 476 498 2.190588 10.90912824 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 225 1.2099999999999998e-72   NR CEP00218.1 37360 g444 i0 69.4 2.82530120481928 157 45 92.8 1 2 463 7 163 CEP00218.1 hypothetical protein PBRA_007952 [Plasmodiophora brassicae] diamond 1407 225 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
26717916 26717916 PRJNA1012699_P_NODE_3641_length_245_cov_0.901163_g3609_i0 PRJNA1012699 3641 245 0.901163 2.20784935 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 57 3.61e-7   NR GFH53639.1 426638 g3609 i0 43.3 0.820408163265306 67 28 69.8 1 237 67 740 806 GFH53639.1 hypothetical protein CTEN210_10115 [Chaetoceros tenuissimus] diamond 201 57 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
28550981 28550981 PRJNA1012699_P_NODE_3867_length_243_cov_0.917647_g3835_i0 PRJNA1012699 3867 243 0.917647 2.22988221 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 50.8 5.26e-5   NR KAH9116918.1 100861 g3835 i0 49.2 1.5679012345679 59 25 72.8 2 222 46 318 371 KAH9116918.1 hypothetical protein LEN26_012844 [Aphanomyces euteiches] diamond 381 50.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29245454 29245454 PRJNA1012699_P_NODE_3129_length_249_cov_0.886364_g3097_i0 PRJNA1012699 3129 249 0.886364 2.20704636 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0269   NR CEP02334.1 37360 g3097 i0 34.9 1 83 50 98.8 2 247 2 122 201 CEP02334.1 hypothetical protein PBRA_008918 [Plasmodiophora brassicae] diamond 249 43.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29371773 29371773 PRJNA1012699_P_NODE_3269_length_248_cov_0.891429_g3237_i0 PRJNA1012699 3269 248 0.891429 2.21074392 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 63.5 1.45e-9   NR XP_004039736.1 5932 g3237 i0 42.3 0.858870967741935 71 41 85.9 0 215 3 2 72 XP_004039736.1 hypothetical protein IMG5_011820 [Ichthyophthirius multifiliis] diamond 213 63.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29561015 29561015 PRJNA1012699_P_NODE_1790_length_291_cov_1.068807_g1758_i0 PRJNA1012699 1790 291 1.068807 3.11022837 Cafeteria roenbergensis 33653 SAR_Eukaryotes SAR_Eukaryotes 108 3.3200000000000004e-26   NR KAA0161520.1 33653 g1758 i0 65 4.16494845360825 80 26 80.4 1 3 236 247 326 KAA0161520.1 hypothetical protein FNF31_03803 [Cafeteria roenbergensis] diamond 1212 108 1 Eukaryota Sar     Bigyra Bicosoecida Cafeteriaceae Cafeteria Cafeteria roenbergensis
29718771 29718771 PRJNA1012699_P_NODE_1890_length_285_cov_1.462264_g1858_i0 PRJNA1012699 1890 285 1.462264 4.1674524 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 52.4 2.49e-5   NR KAF0720703.1 120398 g1858 i0 34.9 1.74736842105263 83 50 87.4 1 272 24 536 614 KAF0720703.1 hypothetical protein As57867_000128 [Aphanomyces stellatus] diamond 498 52.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
31290884 31290884 PRJNA1012699_P_NODE_2755_length_252_cov_0.871508_g2723_i0 PRJNA1012699 2755 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 42.7 0.0385   NR RQM20357.1 112090 g2723 i0 53.3 1.46428571428571 30 14 35.7 0 239 150 260 289 RQM20357.1 hypothetical protein B5M09_003936 [Aphanomyces astaci] diamond 369 42.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31425252 31425252 PRJNA1012699_P_NODE_3696_length_244_cov_0.912281_g3664_i0 PRJNA1012699 3696 244 0.912281 2.22596564 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 51.6 2.9e-5   NR CAE8595186.1 89957 g3664 i0 57.9 0.467213114754098 38 16 46.7 0 237 124 559 596 CAE8595186.1 unnamed protein product [Polarella glacialis] diamond 114 51.6 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;