RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA1012699", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 9 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 9 ✖

bioproject 1

  • PRJNA1012699 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9085564 9085564 PRJNA1012699_P_NODE_1168_length_343_cov_2.859259_g1136_i0 PRJNA1012699 1168 343 2.859259 9.80725837 Metazoa 33208 Mollusca Mollusca 148 2.6399999999999992e-43   NR XP_022313313.1 6565 g1136 i0 70.4 25.8454810495627 98 29 85.7 0 48 341 5 102 XP_022313313.1 40S ribosomal protein S12-like [Crassostrea virginica] diamond 8865 149 0.993288590604027 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
15030168 15030168 PRJNA1012699_P_NODE_1832_length_288_cov_1.437209_g1800_i0 PRJNA1012699 1832 288 1.437209 4.13916192 Magallana gigas 29159 Mollusca Mollusca 158 1.0899999999999999e-43   NR XP_011413946.3 29159 g1800 i0 74.2 5.79166666666667 93 24 96.9 0 279 1 416 508 XP_011413946.3 aspartate--tRNA ligase, cytoplasmic isoform X2 [Magallana gigas] diamond 1668 158 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
24384107 24384107 PRJNA1012699_P_NODE_2140_length_273_cov_3.025000_g2108_i0 PRJNA1012699 2140 273 3.025 8.25825 Metazoa 33208 Mollusca Mollusca 147 4.0599999999999986e-43   NR XP_034334635.1 29159 g2108 i0 73.3 5.95604395604396 90 24 98.9 0 271 2 27 116 XP_034334635.1 large ribosomal subunit protein uL15 [Magallana gigas] diamond 1626 147 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
28771744 28771744 PRJNA1012699_P_NODE_1047_length_358_cov_2.614035_g1015_i0 PRJNA1012699 1047 358 2.614035 9.3582453 Plakobranchus ocellatus 259542 Mollusca Mollusca 149 1.13e-42   NR GFO47253.1 259542 g1015 i0 65.8 11.8491620111732 117 40 98 0 6 356 66 182 GFO47253.1 60S ribosomal protein l13a [Plakobranchus ocellatus] diamond 4242 149 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus
29056102 29056102 PRJNA1012699_P_NODE_3248_length_248_cov_0.891429_g3216_i0 PRJNA1012699 3248 248 0.891429 2.21074392 Saccostrea cuccullata 36930 Mollusca Mollusca 67 1.13e-10   NR XP_062619219.1 36930 g3216 i0 57.4 1.28225806451613 47 19 56.9 1 38 178 33 78 XP_062619219.1 LOW QUALITY PROTEIN: uncharacterized protein LOC134280779 [Saccostrea cuccullata] diamond 318 67 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
29592344 29592344 PRJNA1012699_P_NODE_3890_length_243_cov_0.917647_g3858_i0 PRJNA1012699 3890 243 0.917647 2.22988221 Saccostrea echinata 191078 Mollusca Mollusca 59.7 1.94e-8   NR XP_061174678.1 191078 g3858 i0 37.8 0.91358024691358 74 46 91.4 0 5 226 82 155 XP_061174678.1 phosphatidylinositol-glycan biosynthesis class F protein-like [Saccostrea echinata] diamond 222 59.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
30501048 30501048 PRJNA1012699_P_NODE_1473_length_311_cov_3.861345_g1441_i0 PRJNA1012699 1473 311 3.861345 12.00878295 Haliotis 6452 Mollusca Mollusca 43.9 0.034   NR XP_048245439.1 6454 g1441 i0 40.8 2.7395498392283 71 34 65.6 3 73 276 2802 2867 XP_048245439.1 uncharacterized protein LOC124135118 [Haliotis rufescens] diamond 852 43.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
30508804 30508804 PRJNA1012699_P_NODE_2253_length_268_cov_3.625641_g2221_i0 PRJNA1012699 2253 268 3.625641 9.71671788 Haliotis rufescens 6454 Mollusca Mollusca 63.9 2e-10   NR XP_046340433.2 6454 g2221 i0 48.4 2.95522388059702 62 32 69.4 0 4 189 87 148 XP_046340433.2 60S ribosomal protein L14-like, partial [Haliotis rufescens] diamond 792 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
32145195 32145195 PRJNA1012699_P_NODE_2278_length_267_cov_1.597938_g2246_i0 PRJNA1012699 2278 267 1.597938 4.26649446 Metazoa 33208 Mollusca Mollusca 80.9 1.81e-15   NR XP_048253471.1 6454 g2246 i0 43.5 11.438202247191 85 48 95.5 0 9 263 338 422 XP_048253471.1 cytochrome P450 3A5-like [Haliotis rufescens] diamond 3054 80.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;