RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1012699", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1012699 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28298124 28298124 PRJNA1012699_P_NODE_2106_length_275_cov_1.490099_g2074_i0 PRJNA1012699 2106 275 1.490099 4.09777225 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 64.3 3.69e-10   NR CAG4719676.1 5763 g2074 i0 42.5 1.59272727272727 73 42 79.6 0 264 46 88 160 CAG4719676.1 unnamed protein product [Naegleria fowleri] diamond 438 64.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29782152 29782152 PRJNA1012699_P_NODE_671_length_430_cov_1.302521_g639_i0 PRJNA1012699 671 430 1.302521 5.6008403 Acrasis kona 1008807 Heterolobosea other_Eukaryota 59.7 1.23e-7   NR KAL0481873.1 1008807 g639 i0 28.4 0.983720930232558 141 83 95.6 5 419 9 46 172 KAL0481873.1 hypothetical protein AKO1_011303 [Acrasis kona] diamond 423 59.7 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;