RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1011844", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1011844 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3983533 3983533 PRJNA1011844_P_NODE_36724_length_819_cov_17.745308_g29249_i0 PRJNA1011844 36724 819 17.745308 145.33407252 Promethearchaeia archaeon 3067280 Archaea Archaea 120 1.33e-29   NR MFO8017686.1 3067280 g29249 i0 41.4 0.556776556776557 152 85 54.9 2 330 779 9 158 MFO8017686.1 ATP-binding protein [Promethearchaeia archaeon] diamond 456 120 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
27192740 27192740 PRJNA1011844_P_NODE_75702_length_421_cov_3.456897_g67204_i0 PRJNA1011844 75702 421 3.456897 14.55353637 Promethearchaeota archaeon 2053489 Archaea Archaea 52.8 6.05e-5   NR NVM37122.1 2053489 g67204 i0 33.3 0.491686460807601 69 44 49.2 1 388 182 215 281 NVM37122.1 hypothetical protein [Promethearchaeota archaeon] diamond 207 52.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
29813562 29813562 PRJNA1011844_P_NODE_3351_length_2765_cov_11.494428_g2246_i0 PRJNA1011844 3351 2765 11.494428 317.8209342 Promethearchaeia archaeon 3067280 Archaea Archaea 250 2.84e-70   NR MFO8018952.1 3067280 g2246 i0 28.4 0.680289330922242 627 226 67.6 20 2342 474 9 416 MFO8018952.1 trehalase family glycosidase [Promethearchaeia archaeon] diamond 1881 250 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;