RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1011844", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1011844 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
156155 156155 PRJNA1011844_P_NODE_139421_length_258_cov_1.659459_g130843_i0 PRJNA1011844 139421 258 1.659459 4.28140422 Ripaglys virus 3130696 Viruses Viruses 82.4 3e-11   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g130843 i0 97.917 0.186046511627907 48 0 18 1 14 60 992 945 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 48 82.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
5258868 5258868 PRJNA1011844_P_NODE_126685_length_274_cov_1.646766_g118107_i0 PRJNA1011844 126685 274 1.646766 4.51213884 Sopapen virus 3131614 Viruses Viruses 130 1.13e-25   NTclustered gi|2717322942|gb|PP173915.1| 3131614 g118107 i0 91.489 10.0948905109489 94 8 34 0 49 142 434 527 MAG: Sopapen virus isolate SP1A_k141_131186 genomic sequence blastn 2766 130 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopapen virus
23108508 23108508 PRJNA1011844_P_NODE_146079_length_251_cov_0.865169_g137500_i0 PRJNA1011844 146079 251 0.865169 2.17157419 Ripathuj virus 3131458 Viruses Viruses 163 1.01e-35   NTclustered gi|2717322573|gb|PP173760.1| 3131458 g137500 i0 79.668 86.2430278884462 241 38 94 7 11 246 209 443 MAG: Ripathuj virus isolate RCCP2_k141_221326 genomic sequence blastn 21647 163 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripathuj virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;