RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA1011844", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 11 ✖

tax_phylum 1

  • Duplornaviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1011844 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21834348 21834348 PRJNA1011844_P_NODE_64018_length_495_cov_2.625592_g55601_i0 PRJNA1011844 64018 495 2.625592 12.9966804 Orthoreovirus avis 3431493 Viruses Viruses 52.8 0.048   NTclustered gi|939733447|gb|KR856980.1| 38170 g55601 i0 100 0.226262626262626 28 0 6 0 405 432 251 224 Avian orthoreovirus isolate Reo/PA/Broiler/01382/14 sigma C gene, partial cds blastn 112 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus avis
26971314 26971314 PRJNA1011844_P_NODE_129002_length_271_cov_1.404040_g120424_i0 PRJNA1011844 129002 271 1.40404 3.8049484 Xian Totiv tick virus 1 2972357 Viruses Viruses 89.7 1.52e-18   NR UYL95673.1 2972357 g120424 i0 52.9 0.940959409594096 85 37 90.8 2 12 257 465 549 UYL95673.1 MAG: capsid protein [Xian Totiv tick virus 1] diamond 255 89.7 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Xian Totiv tick virus 1
27414215 27414215 PRJNA1011844_P_NODE_110223_length_302_cov_2.227074_g101648_i0 PRJNA1011844 110223 302 2.227074 6.72576348 Erysiphe necator associated totivirus 7 2737097 Viruses Viruses 61.2 2.36e-8   NR QJW70338.1 2737097 g101648 i0 35.7 2.87086092715232 98 63 97.4 0 295 2 26 123 QJW70338.1 coat protein [Erysiphe necator associated totivirus 7] diamond 867 61.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Erysiphe necator associated totivirus 7
28203119 28203119 PRJNA1011844_P_NODE_143966_length_253_cov_1.350000_g135388_i0 PRJNA1011844 143966 253 1.35 3.4155 Totivirus sp. 2776824 Viruses Viruses 126 8.7e-34   NR QOQ37363.1 2776824 g135388 i0 95.2 0.74703557312253 63 3 74.7 0 193 5 1 63 QOQ37363.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] diamond 189 126 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
29143160 29143160 PRJNA1011844_P_NODE_149149_length_249_cov_0.875000_g140570_i0 PRJNA1011844 149149 249 0.875 2.17875 Ghabrivirales 2732540 Viruses Viruses 68.6 3.32e-11   NR WAK77569.1 1955172 g140570 i0 41.8 6.49397590361446 79 41 91.6 2 228 1 7 83 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 1617 68.6 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
29403159 29403159 PRJNA1011844_P_NODE_138729_length_259_cov_1.387097_g130151_i0 PRJNA1011844 138729 259 1.387097 3.59258123 Totivirus sp. 2776824 Viruses Viruses 154 7.91e-43   NR QOQ37362.1 2776824 g130151 i0 84.7 1.96911196911197 85 13 98.5 0 3 257 109 193 QOQ37362.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] diamond 510 154 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
29655369 29655369 PRJNA1011844_P_NODE_158250_length_243_cov_0.905882_g149670_i0 PRJNA1011844 158250 243 0.905882 2.20129326 Totivirus sp. 2776824 Viruses Viruses 92.4 1.05e-20   NR QOQ37363.1 2776824 g149670 i0 83.7 0.604938271604938 49 8 60.5 0 231 85 140 188 QOQ37363.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] diamond 147 92.4 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
30160884 30160884 PRJNA1011844_P_NODE_146832_length_250_cov_2.536723_g138253_i0 PRJNA1011844 146832 250 2.536723 6.3418075 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 143 1.27e-37   NR CAI9858973.1 3048756 g138253 i0 82.9 0.984 82 14 98.4 0 4 249 174 255 CAI9858973.1 RNA-dependent RNA polymerase [Malassezia globosa associated totivirus 1] diamond 246 143 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
30319623 30319623 PRJNA1011844_P_NODE_123632_length_278_cov_2.536585_g115055_i0 PRJNA1011844 123632 278 2.536585 7.0517063 Totiviridae sp. 1955172 Viruses Viruses 70.5 1.02e-11   NR QVG74809.1 1955172 g115055 i0 40.7 1.96402877697842 91 52 96 2 267 1 880 970 QVG74809.1 hypothetical protein 1 [Totiviridae sp.] diamond 546 70.5 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
30634865 30634865 PRJNA1011844_P_NODE_117653_length_287_cov_2.060748_g109077_i0 PRJNA1011844 117653 287 2.060748 5.91434676 Totiviridae sp. 1955172 Viruses Viruses 96.3 9.68e-21   NR WAK77450.1 1955172 g109077 i0 51.2 1.71428571428571 84 41 87.8 0 258 7 262 345 WAK77450.1 MAG: capsid protein [Totiviridae sp.] diamond 492 96.3 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
31362091 31362091 PRJNA1011844_P_NODE_141036_length_256_cov_2.174863_g132458_i0 PRJNA1011844 141036 256 2.174863 5.56764928 Totiviridae sp. 1955172 Viruses Viruses 53.1 9.17e-6   NR WAK77569.1 1955172 g132458 i0 36.3 0.9375 80 51 93.8 0 12 251 370 449 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 240 53.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;