RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28929656 28929656 PRJNA1011844_P_NODE_67328_length_471_cov_1.452261_g58889_i0 PRJNA1011844 67328 471 1.452261 6.84014931 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.9 0.00255   NR MBM3215517.1 2026781 g58889 i0 56.1 0.261146496815287 41 18 26.1 0 343 221 86 126 MBM3215517.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 123 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29465924 29465924 PRJNA1011844_P_NODE_145990_length_251_cov_0.865169_g137411_i0 PRJNA1011844 145990 251 0.865169 2.17157419 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 75.1 1.68e-13   NR HIE27544.1 2026781 g137411 i0 74.1 3.8605577689243 54 13 64.5 1 84 245 1 53 HIE27544.1 helicase [Candidatus Poribacteria bacterium] diamond 969 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30856262 30856262 PRJNA1011844_P_NODE_56454_length_559_cov_3.238683_g48101_i0 PRJNA1011844 56454 559 3.238683 18.10423797 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 53.5 1.18e-4   NR MDE0022016.1 2026781 g48101 i0 55.8 0.230769230769231 43 19 23.1 0 271 399 34 76 MDE0022016.1 ankyrin repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 129 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31235302 31235302 PRJNA1011844_P_NODE_30895_length_937_cov_10.513889_g24093_i0 PRJNA1011844 30895 937 10.513889 98.51513993 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.9 0.0276   NR MBM3216766.1 2026781 g24093 i0 47.3 0.550693703308431 55 28 17.3 1 382 221 6 60 MBM3216766.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 516 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;