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contig_metadata

18 rows where bioproject = "PRJNA1011844" and tax_phylum = "Brachiopoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011844 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
156963 156963 PRJNA1011844_P_NODE_31681_length_920_cov_7.621015_g24775_i0 PRJNA1011844 31681 920 7.621015 70.113338 Metazoa 33208 Brachiopoda other_Eukaryota 154 1.55e-38   NR XP_013382135.1 7574 g24775 i0 48 18.6945652173913 179 70 56.7 4 688 167 390 550 XP_013382135.1 lipase maturation factor 1-like [Lingula anatina] diamond 17199 154 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
2706321 2706321 PRJNA1011844_P_NODE_13163_length_1576_cov_320.371923_g9528_i0 PRJNA1011844 13163 1576 320.371923 5049.06150648 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 278 1.2799999999999999e-84   NR XP_013403357.1 7574 g9528 i0 38 4.5989847715736 424 237 79.8 11 1463 207 2 404 XP_013403357.1 nucleoredoxin [Lingula anatina] diamond 7248 278 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
5259634 5259634 PRJNA1011844_P_NODE_24025_length_1119_cov_6.498088_g18237_i0 PRJNA1011844 24025 1119 6.498088 72.71360472 Lingula anatina 7574 Brachiopoda other_Eukaryota 54.7 0.032   NTclustered gi|919053714|ref|XM_013553342.1| 7574 g18237 i0 100 0.0259159964253798 29 0 3 0 541 569 2214 2186 PREDICTED: Lingula anatina optineurin (LOC106172566), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
12910463 12910463 PRJNA1011844_P_NODE_2891_length_2915_cov_115.092540_g1936_i0 PRJNA1011844 2891 2915 115.09254 3354.947541 Lingula anatina 7574 Brachiopoda other_Eukaryota 181 3.3999999999999997e-44   NR XP_013410754.1 7574 g1936 i0 34 2.69536878216124 377 217 37.5 10 1960 869 158 515 XP_013410754.1 DDB1- and CUL4-associated factor 11 isoform X1 [Lingula anatina] diamond 7857 181 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
16734877 16734877 PRJNA1011844_P_NODE_94574_length_343_cov_6.588889_g86012_i0 PRJNA1011844 94574 343 6.588889 22.59988927 Lingula anatina 7574 Brachiopoda other_Eukaryota 196 1.42e-45   NTclustered gi|919069159|ref|XM_013560604.1| 7574 g86012 i0 84.422 59.5801749271137 199 31 58 0 128 326 563 365 PREDICTED: Lingula anatina histone H2A (LOC106177742), mRNA blastn 20436 196 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
23109754 23109754 PRJNA1011844_P_NODE_58719_length_538_cov_2.870968_g50341_i0 PRJNA1011844 58719 538 2.870968 15.44580784 Lingula anatina 7574 Brachiopoda other_Eukaryota 220 1.37e-52   NTclustered gi|919069159|ref|XM_013560604.1| 7574 g50341 i0 81.159 28.9089219330855 276 50 51 2 120 394 563 289 PREDICTED: Lingula anatina histone H2A (LOC106177742), mRNA blastn 15553 220 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26876852 26876852 PRJNA1011844_P_NODE_301_length_6183_cov_17.306219_g168_i0 PRJNA1011844 301 6183 17.306219 1070.04352077 Lingula anatina 7574 Brachiopoda other_Eukaryota 59.3 3.04e-4   NR XP_023930741.1 7574 g168 i0 35 0.193110140708394 103 63 4.9 3 1985 2284 1083 1184 XP_023930741.1 macrophage mannose receptor 1-like [Lingula anatina] diamond 1194 59.7 0.993299832495812 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26995172 26995172 PRJNA1011844_P_NODE_26682_length_1043_cov_9.364948_g20463_i0 PRJNA1011844 26682 1043 9.364948 97.67640764 Metazoa 33208 Brachiopoda other_Eukaryota 390 8.319999999999997e-132   NR XP_013409929.1 7574 g20463 i0 56.3 2.80441035474593 341 139 95.2 5 45 1037 1 341 XP_013409929.1 cathepsin B [Lingula anatina] diamond 2925 392 0.994897959183674 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28290287 28290287 PRJNA1011844_P_NODE_71526_length_444_cov_5.261456_g63048_i0 PRJNA1011844 71526 444 5.261456 23.36086464 Opisthokonta 33154 Brachiopoda other_Eukaryota 52.8 1.04e-4   NR XP_013404189.2 7574 g63048 i0 41.4 2.32432432432432 70 41 47.3 0 211 2 536 605 XP_013404189.2 multidrug resistance-associated protein 1 [Lingula anatina] diamond 1032 53.1 0.994350282485876 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29174649 29174649 PRJNA1011844_P_NODE_172769_length_223_cov_4.566667_g164188_i0 PRJNA1011844 172769 223 4.566667 10.18366741 Metazoa 33208 Brachiopoda other_Eukaryota 56.6 3.64e-7   NR XP_013387835.1 7574 g164188 i0 52.1 1.9103139013452901 48 23 64.6 0 147 4 384 431 XP_013387835.1 POC1 centriolar protein homolog A-like isoform X2 [Lingula anatina] diamond 426 56.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29213998 29213998 PRJNA1011844_P_NODE_22089_length_1180_cov_5.181572_g16646_i0 PRJNA1011844 22089 1180 5.181572 61.1425496 Lingula anatina 7574 Brachiopoda other_Eukaryota 144 5.29e-34   NR XP_023932046.1 7574 g16646 i0 32.6 6.10169491525424 282 174 69.4 4 16 834 267 541 XP_023932046.1 LOW QUALITY PROTEIN: protein F37C4.5-like [Lingula anatina] diamond 7200 144 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29679347 29679347 PRJNA1011844_P_NODE_28910_length_984_cov_44.578485_g21574_i1 PRJNA1011844 28910 984 44.578485 438.6522924 Metazoa 33208 Brachiopoda other_Eukaryota 69.7 1.47e-9   NR XP_013417454.1 7574 g21574 i1 31.3 2.27439024390244 163 103 49.7 4 867 379 60 213 XP_013417454.1 glutathione S-transferase Yb-3 [Lingula anatina] diamond 2238 70.1 0.994293865905849 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29837422 29837422 PRJNA1011844_P_NODE_124411_length_277_cov_2.102941_g115834_i0 PRJNA1011844 124411 277 2.102941 5.82514657 Opisthokonta 33154 Brachiopoda other_Eukaryota 47 0.00178   NR XP_013385210.1 7574 g115834 i0 35.9 3.29241877256318 78 49 84.5 1 273 40 304 380 XP_013385210.1 UBX domain-containing protein 4 [Lingula anatina] diamond 912 47.4 0.991561181434599 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30003298 30003298 PRJNA1011844_P_NODE_153431_length_246_cov_0.890173_g144851_i0 PRJNA1011844 153431 246 0.890173 2.18982558 Lingula anatina 7574 Brachiopoda other_Eukaryota 90.1 6e-19   NR XP_023930112.1 7574 g144851 i0 64.1 7.79268292682927 64 23 78 0 12 203 272 335 XP_023930112.1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 isoform X2 [Lingula anatina] diamond 1917 90.1 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30224272 30224272 PRJNA1011844_P_NODE_312_length_6085_cov_16.743679_g168_i1 PRJNA1011844 312 6085 16.743679 1018.85286715 Lingula anatina 7574 Brachiopoda other_Eukaryota 59.3 2.99e-4   NR XP_023930741.1 7574 g168 i1 35 0.196220213640099 103 63 4.9 3 4199 3900 1083 1184 XP_023930741.1 macrophage mannose receptor 1-like [Lingula anatina] diamond 1194 59.7 0.993299832495812 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30880133 30880133 PRJNA1011844_P_NODE_78614_length_406_cov_5.330330_g70101_i0 PRJNA1011844 78614 406 5.33033 21.6411398 Metazoa 33208 Brachiopoda other_Eukaryota 56.2 4.38e-6   NR XP_013405517.2 7574 g70101 i0 39.7 2.90394088669951 78 41 56.2 3 59 286 704 777 XP_013405517.2 macrophage mannose receptor 1-like [Lingula anatina] diamond 1179 56.6 0.992932862190813 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31354332 31354332 PRJNA1011844_P_NODE_171676_length_226_cov_3.163399_g163095_i0 PRJNA1011844 171676 226 3.163399 7.14928174 Metazoa 33208 Brachiopoda other_Eukaryota 50.8 4.29e-5   NR XP_013387906.1 7574 g163095 i0 40.7 7.85840707964602 59 35 78.3 0 19 195 374 432 XP_013387906.1 metabotropic glutamate receptor 3 [Lingula anatina] diamond 1776 50.8 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31575758 31575758 PRJNA1011844_P_NODE_114496_length_292_cov_3.511416_g105920_i0 PRJNA1011844 114496 292 3.511416 10.25333472 Metazoa 33208 Brachiopoda other_Eukaryota 98.6 1.54e-21   NR XP_013394675.1 7574 g105920 i0 53 3.07191780821918 100 43 98.6 3 290 3 388 487 XP_013394675.1 protein DD3-3-like [Lingula anatina] diamond 897 98.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;