RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1011844", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15460382 15460382 PRJNA1011844_P_NODE_80433_length_398_cov_2.566154_g71909_i0 PRJNA1011844 80433 398 2.566154 10.21329292 Eukaryota 2759 Fungi Fungi 150 4.89e-42   NR KAG5459160.1 278681 g71909 i0 63.8 5.8643216080402 116 39 87.4 1 49 396 141 253 KAG5459160.1 MAG: ribosomal protein S17-domain-containing protein, partial [Olpidium bornovanus] diamond 2334 150 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
27034790 27034790 PRJNA1011844_P_NODE_48262_length_647_cov_2.263066_g40055_i0 PRJNA1011844 48262 647 2.263066 14.64203702 Olpidium bornovanus 278681 Fungi Fungi 51.6 5.55e-4   NR KAG5457012.1 278681 g40055 i0 54.5 0.500772797527048 55 24 25 1 635 474 155 209 KAG5457012.1 MAG: ankyrin repeat-containing domain protein [Olpidium bornovanus] diamond 324 51.6 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;