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contig_metadata

10 rows where bioproject = "PRJNA1011844", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 10 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 10 ✖

bioproject 1

  • PRJNA1011844 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27097884 27097884 PRJNA1011844_P_NODE_126242_length_274_cov_10.452736_g117664_i0 PRJNA1011844 126242 274 10.452736 28.64049664 Candidatus Velamenicoccus archaeovorus 1930593 Bacteria Bacteria 55.1 2.46e-6   NR WP_128699025.1 1930593 g117664 i0 58.5 2.37591240875912 41 17 44.9 0 19 141 260 300 WP_128699025.1 mucoidy inhibitor MuiA family protein [Candidatus Velamenicoccus archaeovorus] diamond 651 55.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Velamenicoccus Candidatus Velamenicoccus archaeovorus
28803058 28803058 PRJNA1011844_P_NODE_47808_length_652_cov_6.200345_g39613_i0 PRJNA1011844 47808 652 6.200345 40.4262494 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 46.6 0.044   NR MDO8675958.1 2035772 g39613 i0 26.5 0.676380368098159 147 96 63 6 11 421 198 342 MDO8675958.1 glutamate--tRNA ligase [Candidatus Omnitrophota bacterium] diamond 441 46.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29710886 29710886 PRJNA1011844_P_NODE_67870_length_467_cov_4.007614_g59422_i0 PRJNA1011844 67870 467 4.007614 18.71555738 PVC group 1783257 Bacteria Bacteria 51.6 2.41e-4   NR MCA9399637.1 2035772 g59422 i0 39.7 0.809421841541756 73 39 46.9 1 25 243 157 224 MCA9399637.1 ankyrin repeat domain-containing protein [Candidatus Omnitrophota bacterium] diamond 378 52 0.992307692307692 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29876933 29876933 PRJNA1011844_P_NODE_177011_length_208_cov_4.622222_g168429_i0 PRJNA1011844 177011 208 4.622222 9.61422176 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.5 0.0125   NR MFC1631445.1 2035772 g168429 i0 85 1.3125 20 3 28.8 0 148 207 16 35 MFC1631445.1 amidinotransferase [Candidatus Omnitrophota bacterium] diamond 273 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30287875 30287875 PRJNA1011844_P_NODE_109572_length_303_cov_7.834783_g100997_i0 PRJNA1011844 109572 303 7.834783 23.73939249 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.5 0.038   NR MCB9769720.1 2035772 g100997 i0 36.4 0.762376237623762 77 39 70.3 3 55 267 110 182 MCB9769720.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 231 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31457019 31457019 PRJNA1011844_P_NODE_58276_length_542_cov_4.138593_g49904_i0 PRJNA1011844 58276 542 4.138593 22.43117406 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 1.26e-4   NR MCL5097506.1 2035772 g49904 i0 30.4 0.874538745387454 158 94 84.7 7 69 527 504 650 MCL5097506.1 glycoside hydrolase family 2 [Candidatus Omnitrophota bacterium] diamond 474 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32176930 32176930 PRJNA1011844_P_NODE_173218_length_221_cov_5.533784_g164637_i0 PRJNA1011844 173218 221 5.533784 12.22966264 Bacteria 2 Bacteria Bacteria 100 1.2e-22   NR MCC6758542.1 2035772 g164637 i0 61.8 2.82352941176471 68 26 92.3 0 12 215 177 244 MCC6758542.1 MBOAT family protein [Candidatus Omnitrophota bacterium] diamond 624 100 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32342827 32342827 PRJNA1011844_P_NODE_115839_length_290_cov_1.497696_g107263_i0 PRJNA1011844 115839 290 1.497696 4.3433184 Omnitrophica bacterium RIFCSPHIGHO2_ 2035772 Bacteria Bacteria 72.8 2.1e-14   NR OGW82557.1 1801823 g107263 i0 55.4 4.03448275862069 65 29 67.2 0 87 281 3 67 OGW82557.1 MAG: 30S ribosomal protein S15 [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18] diamond 1170 72.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18
32406053 32406053 PRJNA1011844_P_NODE_48659_length_642_cov_4.708260_g40443_i0 PRJNA1011844 48659 642 4.70826 30.2270292 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 68.6 1.33e-9   NR MCK5014156.1 2035772 g40443 i0 32.3 0.883177570093458 189 103 77.6 7 631 134 73 259 MCK5014156.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 567 68.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32784352 32784352 PRJNA1011844_P_NODE_112280_length_297_cov_3.102679_g103704_i0 PRJNA1011844 112280 297 3.102679 9.21495663 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.0463   NR MEK6727990.1 2035772 g103704 i0 34.7 0.727272727272727 72 45 70.7 1 69 278 90 161 MEK6727990.1 biotin synthase BioB [Candidatus Omnitrophota bacterium] diamond 216 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;