RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1011833", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1011833 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30414125 30414125 PRJNA1011833_S_NODE_24633_length_240_cov_1.609137_g24213_i0 PRJNA1011833 24633 240 1.609137 3.8619288 Mitosporidium daphniae 1485682 Fungi Fungi 45.4 7.04e-4   NR XP_013239108.1 1485682 g24213 i0 53.1 1.375 32 15 40 0 159 64 33 64 XP_013239108.1 uncharacterized protein DI09_145p20 [Mitosporidium daphniae] diamond 330 45.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
30445612 30445612 PRJNA1011833_S_NODE_8093_length_400_cov_1.470588_g7676_i0 PRJNA1011833 8093 400 1.470588 5.882352 Cucumispora dikerogammari 658444 Fungi Fungi 45.1 0.00575   NR KAF7685175.1 658444 g7676 i0 48.9 0.3525 47 24 35.3 0 113 253 25 71 KAF7685175.1 hypothetical protein CDIK_4076 [Cucumispora dikerogammari] diamond 141 45.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Cucumispora Cucumispora dikerogammari
31867816 31867816 PRJNA1011833_S_NODE_16137_length_301_cov_1.802326_g15717_i0 PRJNA1011833 16137 301 1.802326 5.42500126 Edhazardia aedis USNM 41457 1003232 Fungi Fungi 54.3 6.39e-6   NR EJW03807.1 1003232 g15717 i0 43.8 2.10299003322259 64 35 62.8 1 193 5 123 186 EJW03807.1 hypothetical protein EDEG_01899 [Edhazardia aedis USNM 41457] diamond 633 54.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Culicosporidae Edhazardia Edhazardia aedis
32493275 32493275 PRJNA1011833_S_NODE_53799_length_157_cov_1.684211_g53379_i0 PRJNA1011833 53799 157 1.684211 2.64421127 Opisthokonta 33154 Fungi Fungi 54.3 3.48e-7   NR KAG0439339.1 279532 g53379 i0 59 5.86624203821656 39 16 74.5 0 118 2 94 132 KAG0439339.1 hypothetical protein DMUE_2498 [Dictyocoela muelleri] diamond 921 54.7 0.992687385740402 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;