RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1010780" and tax_phylum = "Orthonectida"

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tax_superkingdom 1

tax_phylum 1

  • Orthonectida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010780 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29465763 29465763 PRJNA1010780_S_NODE_22970_length_346_cov_3.565916_g21681_i0 PRJNA1010780 22970 346 3.565916 12.33806936 Intoshia linei 1819745 Orthonectida other_Eukaryota 43.5 0.0437   NR OAF64535.1 1819745 g21681 i0 35.1 0.667630057803468 77 40 66.8 2 106 336 71 137 OAF64535.1 hypothetical protein A3Q56_07762 [Intoshia linei] diamond 231 43.5 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29616183 29616183 PRJNA1010780_S_NODE_38230_length_214_cov_3.251397_g36941_i0 PRJNA1010780 38230 214 3.251397 6.95798958 Opisthokonta 33154 Orthonectida other_Eukaryota 48.1 3.27e-4   NR OAF70789.1 1819745 g36941 i0 36.9 4.28971962616822 65 41 91.1 0 14 208 631 695 OAF70789.1 Transcription elongation factor SPT5 [Intoshia linei] diamond 918 48.1 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
30919502 30919502 PRJNA1010780_S_NODE_48394_length_179_cov_2.006944_g47105_i0 PRJNA1010780 48394 179 2.006944 3.59242976 Intoshia linei 1819745 Orthonectida other_Eukaryota 77 9.39e-15   NR OAF70225.1 1819745 g47105 i0 64.8 0.905027932960894 54 19 90.5 0 1 162 310 363 OAF70225.1 Pyruvate dehydrogenase E1 component subunit beta [Intoshia linei] diamond 162 77 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
32215968 32215968 PRJNA1010780_S_NODE_17238_length_471_cov_2.935780_g15973_i0 PRJNA1010780 17238 471 2.93578 13.8275238 Intoshia linei 1819745 Orthonectida other_Eukaryota 63.9 1.83e-8   NR OAF70112.1 1819745 g15973 i0 25.8 1.03821656050955 163 107 96.8 5 470 15 1842 2001 OAF70112.1 DnaJ subfamily C member 13 [Intoshia linei] diamond 489 63.9 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;