contig_metadata
12 rows where bioproject = "PRJNA1010780" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19280691 | 19280691 | PRJNA1010780_S_NODE_40456_length_205_cov_1.800000_g39167_i0 | PRJNA1010780 | 40456 | 205 | 1.8 | 3.69 | Mycoplasmopsis columbina | 114881 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|1563806405|emb|LR215041.1| | 114881 | g39167 | i0 | 100 | 0.141463414634146 | 29 | 0 | 14 | 0 | 163 | 191 | 376985 | 377013 | Mycoplasma columbinum strain NCTC10178 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis columbina | |||
| 26995147 | 26995147 | PRJNA1010780_S_NODE_63422_length_150_cov_1.582609_g62133_i0 | PRJNA1010780 | 63422 | 150 | 1.582609 | 2.3739135 | Bacillati | 1783272 | Bacteria | Bacteria | 59.7 | 1.11e-8 | NR | MDV3166825.1 | 126585 | g62133 | i0 | 50 | 3.96 | 50 | 23 | 100 | 1 | 1 | 150 | 458 | 505 | MDV3166825.1 isoleucine--tRNA ligase [Candidatus Phytoplasma vignae] | diamond | 594 | 60.1 | 0.993344425956739 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma vignae | ||
| 27129019 | 27129019 | PRJNA1010780_S_NODE_5362_length_1164_cov_6.218778_g4772_i1 | PRJNA1010780 | 5362 | 1164 | 6.218778 | 72.38657592 | endosymbiont GvMRE of Glomus versiforme | 2039283 | Bacteria | Bacteria | 99 | 6.63e-19 | NR | WP_147410055.1 | 2039283 | g4772 | i1 | 48.2 | 0.293814432989691 | 114 | 43 | 28.4 | 2 | 1096 | 767 | 1 | 102 | WP_147410055.1 molecular chaperone DnaJ [endosymbiont GvMRE of Glomus versiforme] | diamond | 342 | 99 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | endosymbiont GvMRE of Glomus versiforme | ||||
| 27414111 | 27414111 | PRJNA1010780_S_NODE_28963_length_274_cov_1.983264_g27674_i0 | PRJNA1010780 | 28963 | 274 | 1.983264 | 5.43414336 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 60.1 | 4.47e-8 | NR | MDO9628657.1 | 1898209 | g27674 | i0 | 35.6 | 0.952554744525547 | 87 | 55 | 95.3 | 1 | 4 | 264 | 203 | 288 | MDO9628657.1 InlB B-repeat-containing protein [Acholeplasmataceae bacterium] | diamond | 261 | 60.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 27501226 | 27501226 | PRJNA1010780_S_NODE_51943_length_170_cov_2.333333_g50654_i0 | PRJNA1010780 | 51943 | 170 | 2.333333 | 3.9666661 | root | 1 | Root_unresolved | Root_unresolved | 41.2 | 0.0494 | NR | WIF89111.1 | 2148 | g50654 | i0 | 41 | 3.75882352941176 | 39 | 23 | 68.8 | 0 | 53 | 169 | 190 | 228 | WIF89111.1 InlB B-repeat-containing protein [Acholeplasma laidlawii] | diamond | 639 | 41.6 | 0.990384615384615 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasma | Acholeplasma laidlawii | ||
| 29584610 | 29584610 | PRJNA1010780_S_NODE_34110_length_236_cov_1.462687_g32821_i0 | PRJNA1010780 | 34110 | 236 | 1.462687 | 3.45194132 | Bacteria | 2 | Bacteria | Bacteria | 47.4 | 7.78e-4 | NR | NLF48464.1 | 1898209 | g32821 | i0 | 57.9 | 2.26271186440678 | 38 | 14 | 48.3 | 1 | 2 | 115 | 404 | 439 | NLF48464.1 aldehyde dehydrogenase [Acholeplasmataceae bacterium] | diamond | 534 | 47.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 30097737 | 30097737 | PRJNA1010780_S_NODE_5292_length_1174_cov_6.220369_g4772_i0 | PRJNA1010780 | 5292 | 1174 | 6.220369 | 73.02713206 | endosymbiont GvMRE of Glomus versiforme | 2039283 | Bacteria | Bacteria | 99 | 6.89e-19 | NR | WP_147410055.1 | 2039283 | g4772 | i0 | 48.2 | 0.291311754684838 | 114 | 43 | 28.1 | 2 | 1106 | 777 | 1 | 102 | WP_147410055.1 molecular chaperone DnaJ [endosymbiont GvMRE of Glomus versiforme] | diamond | 342 | 99 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | endosymbiont GvMRE of Glomus versiforme | ||||
| 31077388 | 31077388 | PRJNA1010780_S_NODE_23835_length_333_cov_2.184564_g22546_i0 | PRJNA1010780 | 23835 | 333 | 2.184564 | 7.27459812 | Candidatus Izemoplasmatales bacterium | 3018265 | Bacteria | Bacteria | 72 | 5.68e-12 | NR | MFA5037269.1 | 3018265 | g22546 | i0 | 34.8 | 4.03603603603604 | 112 | 71 | 99.1 | 1 | 332 | 3 | 502 | 613 | MFA5037269.1 InlB B-repeat-containing protein [Candidatus Izemoplasmatales bacterium] | diamond | 1344 | 72 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Candidatus Izemoplasmatales | Candidatus Izemoplasmatales bacterium | ||||
| 31614855 | 31614855 | PRJNA1010780_S_NODE_5296_length_1173_cov_9.588752_g4776_i0 | PRJNA1010780 | 5296 | 1173 | 9.588752 | 112.47606096 | Tenericutes bacterium HGW-Tenericutes-1 | 2013844 | Bacteria | Bacteria | 80.9 | 2.22e-12 | NR | PKK99934.1 | 2013844 | g4776 | i0 | 33.7 | 0.416879795396419 | 163 | 85 | 36.1 | 7 | 772 | 350 | 210 | 371 | PKK99934.1 MAG: hypothetical protein CVV56_08770 [Tenericutes bacterium HGW-Tenericutes-1] | diamond | 489 | 80.9 | 1 | Bacteria | Bacillati | Mycoplasmatota | Tenericutes bacterium HGW-Tenericutes-1 | ||||||
| 32437650 | 32437650 | PRJNA1010780_S_NODE_24239_length_327_cov_2.647260_g22950_i0 | PRJNA1010780 | 24239 | 327 | 2.64726 | 8.6565402 | Mycoplasmatota bacterium | 2231116 | Bacteria | Bacteria | 65.9 | 8.38e-10 | NR | QVK16776.1 | 2231116 | g22950 | i0 | 38.2 | 5.55963302752294 | 102 | 53 | 84.4 | 3 | 7 | 282 | 548 | 649 | QVK16776.1 DUF5011 domain-containing protein [Mycoplasmatota bacterium] | diamond | 1818 | 65.9 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmatota bacterium | ||||||
| 32500912 | 32500912 | PRJNA1010780_S_NODE_37479_length_218_cov_1.841530_g36190_i0 | PRJNA1010780 | 37479 | 218 | 1.84153 | 4.0145354 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 48.1 | 3.36e-4 | NR | NLZ61530.1 | 1898209 | g36190 | i0 | 39.2 | 1.96788990825688 | 74 | 40 | 97.7 | 2 | 5 | 217 | 503 | 574 | NLZ61530.1 hypothetical protein [Acholeplasmataceae bacterium] | diamond | 429 | 48.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 32878787 | 32878787 | PRJNA1010780_S_NODE_37280_length_219_cov_1.918478_g35991_i0 | PRJNA1010780 | 37280 | 219 | 1.918478 | 4.20146682 | Candidatus Izimaplasma bacterium HR2 | 1541960 | Bacteria | Bacteria | 47 | 8.82e-4 | NR | KFZ26634.1 | 1541960 | g35991 | i0 | 42 | 1.68493150684932 | 69 | 36 | 90.4 | 2 | 217 | 20 | 759 | 826 | KFZ26634.1 MAG: Regulator of chromosome condensation (RCC1) repeat protein [Candidatus Izimaplasma bacterium HR2] | diamond | 369 | 47 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Candidatus Izemoplasmatales | Candidatus Izemoplasmataceae | Candidatus Izemoplasma | Candidatus Izimoplasma sp. HR2 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;