RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA1010780" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23953858 23953858 PRJNA1010780_S_NODE_15879_length_512_cov_3.245283_g14643_i0 PRJNA1010780 15879 512 3.245283 16.61584896 Minisyncoccota bacterium 2053589 Bacteria Bacteria 73.6 1.39e-13   NR HTH93272.1 2053589 g14643 i0 54.8 1.751953125 62 27 36.3 1 1 186 32 92 HTH93272.1 RNA-binding protein [Candidatus Paceibacterota bacterium] diamond 897 73.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28234553 28234553 PRJNA1010780_S_NODE_32686_length_245_cov_1.738095_g31397_i0 PRJNA1010780 32686 245 1.738095 4.25833275 Minisyncoccota bacterium 2053589 Bacteria Bacteria 68.2 4.08e-11   NR MDD5431287.1 2053589 g31397 i0 65.2 0.563265306122449 46 16 56.3 0 108 245 213 258 MDD5431287.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Candidatus Paceibacterota bacterium] diamond 138 68.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28455915 28455915 PRJNA1010780_S_NODE_12406_length_645_cov_3.101639_g11314_i0 PRJNA1010780 12406 645 3.101639 20.00557155 Minisyncoccia bacterium 3120121 Bacteria Bacteria 69.7 2.64e-10   NR MFA9238562.1 3120121 g11314 i0 29.5 1.4093023255814 156 102 68.8 2 168 611 26 181 MFA9238562.1 DNA ligase [Minisyncoccia bacterium] diamond 909 69.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium
28519047 28519047 PRJNA1010780_S_NODE_25367_length_312_cov_3.588448_g24078_i0 PRJNA1010780 25367 312 3.588448 11.19595776 Minisyncoccota bacterium 2053589 Bacteria Bacteria 88.2 1.03e-18   NR MDD5165045.1 2053589 g24078 i0 49.4 0.817307692307692 85 43 81.7 0 264 10 79 163 MDD5165045.1 NUDIX domain-containing protein [Candidatus Paceibacterota bacterium] diamond 255 88.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28929434 28929434 PRJNA1010780_S_NODE_28688_length_277_cov_1.491736_g27399_i0 PRJNA1010780 28688 277 1.491736 4.13210872 Minisyncoccota bacterium 2053589 Bacteria Bacteria 164 2.95e-45   NR MDP6249807.1 2053589 g27399 i0 77.2 3.985559566787 92 21 99.6 0 276 1 28 119 MDP6249807.1 fused protease/ribonucleoside-triphosphate reductase [Candidatus Paceibacterota bacterium] diamond 1104 164 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30319527 30319527 PRJNA1010780_S_NODE_35772_length_226_cov_2.963351_g34483_i0 PRJNA1010780 35772 226 2.963351 6.69717326 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.3 1.4e-4   NR MDR3547592.1 2053589 g34483 i0 32.4 0.902654867256637 68 46 90.3 0 205 2 216 283 MDR3547592.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 204 49.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30698003 30698003 PRJNA1010780_S_NODE_22174_length_360_cov_2.178462_g20885_i0 PRJNA1010780 22174 360 2.178462 7.8424632 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.3 0.00947   NR MCK9351335.1 2053589 g20885 i0 27.1 0.491666666666667 59 37 44.2 1 68 226 38 96 MCK9351335.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 177 44.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30761362 30761362 PRJNA1010780_S_NODE_18774_length_431_cov_2.272727_g17496_i0 PRJNA1010780 18774 431 2.272727 9.79545337 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.034   NR MDR3582048.1 2053589 g17496 i0 51 0.354988399071926 51 24 35.5 1 431 279 65 114 MDR3582048.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 153 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30792861 30792861 PRJNA1010780_S_NODE_44874_length_189_cov_2.032468_g43585_i0 PRJNA1010780 44874 189 2.032468 3.84136452 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.1 1.79e-6   NR NCN82385.1 2053589 g43585 i0 60 0.555555555555556 35 14 55.6 0 17 121 97 131 NCN82385.1 nicotinate (nicotinamide) nucleotide adenylyltransferase [Candidatus Paceibacterota bacterium] diamond 105 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;